RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 OR4D5Q8NGN0 318 aa18.17■□□□□ 0.5
PVT1-204ENST00000517525 TRGV9Q99603 122 aa18.17■□□□□ 0.5
PVT1-204ENST00000517525 MAGT1Q9H0U3 335 aa18.17■□□□□ 0.5
PVT1-204ENST00000517525 BUB3O43684 328 aa18.16■□□□□ 0.5
PVT1-204ENST00000517525 FABP1P07148 127 aa18.16■□□□□ 0.5
PVT1-204ENST00000517525 NUP62P37198 522 aaPredicted RBP18.16■□□□□ 0.5
PVT1-204ENST00000517525 OR8G2PQ6IF36 304 aa18.16■□□□□ 0.5
PVT1-204ENST00000517525 DCANP1Q8TF63 244 aa18.16■□□□□ 0.5
PVT1-204ENST00000517525 RNF183Q96D59 192 aa18.16■□□□□ 0.5
PVT1-204ENST00000517525 ZFP92A6NM28 416 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 MPTX1A8MV57 137 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 WRBO00258 174 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 SPRY2O43597 315 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 S100ZQ8WXG8 99 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 RNF125Q96EQ8 232 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 C20orf85Q9H1P6 137 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 SEPSECSQ9HD40 501 aaKnown RBP18.15■□□□□ 0.5
PVT1-204ENST00000517525 PFDN2Q9UHV9 154 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 RABAC1Q9UI14 185 aa18.15■□□□□ 0.5
PVT1-204ENST00000517525 TCRBP04435 133 aa18.14■□□□□ 0.49
PVT1-204ENST00000517525 NKX2-1P43699 371 aaPredicted RBP18.14■□□□□ 0.49
PVT1-204ENST00000517525 CSTL1Q9H114 145 aa18.14■□□□□ 0.49
PVT1-204ENST00000517525 STRAPQ9Y3F4 350 aaKnown RBP18.14■□□□□ 0.49
PVT1-204ENST00000517525 RPL35AP18077 110 aaKnown RBP18.13■□□□□ 0.49
PVT1-204ENST00000517525 DEFB131AP59861 70 aa18.13■□□□□ 0.49
PVT1-204ENST00000517525 ZNF124Q15973 351 aa18.13■□□□□ 0.49
PVT1-204ENST00000517525 FAM24BQ8N5W8 94 aa18.13■□□□□ 0.49
PVT1-204ENST00000517525 STXBP6Q8NFX7 210 aa18.13■□□□□ 0.49
PVT1-204ENST00000517525 SMIM8Q96KF7 97 aa18.13■□□□□ 0.49
PVT1-204ENST00000517525 RYR3Q15413 4870 aa18.12■□□□□ 0.49
PVT1-204ENST00000517525 IGKV1OR2-108A0A075B7D4 117 aa18.12■□□□□ 0.49
PVT1-204ENST00000517525 CFDP00746 253 aaPredicted RBP18.12■□□□□ 0.49
PVT1-204ENST00000517525 POLR2GP62487 172 aaKnown RBP eCLIP18.12■□□□□ 0.49
PVT1-204ENST00000517525 ZNF90Q03938 601 aa18.12■□□□□ 0.49
PVT1-204ENST00000517525 SPANXN5Q5MJ07 72 aa18.12■□□□□ 0.49
PVT1-204ENST00000517525 SNRPGP15A8MWD9 76 aa18.11■□□□□ 0.49
PVT1-204ENST00000517525 ATF4P18848 351 aaPredicted RBP18.11■□□□□ 0.49
PVT1-204ENST00000517525 DEFB135Q30KP9 77 aa18.11■□□□□ 0.49
PVT1-204ENST00000517525 TAS2R30P59541 319 aa18.1■□□□□ 0.49
PVT1-204ENST00000517525 IAH1Q2TAA2 248 aaPredicted RBP18.1■□□□□ 0.49
PVT1-204ENST00000517525 C1orf194Q5T5A4 169 aa18.1■□□□□ 0.49
PVT1-204ENST00000517525 GATAD1Q8WUU5 269 aa18.1■□□□□ 0.49
PVT1-204ENST00000517525 PAIP2BQ9ULR5 123 aaKnown RBP18.1■□□□□ 0.49
PVT1-204ENST00000517525 PAX9P55771 341 aa18.09■□□□□ 0.49
PVT1-204ENST00000517525 ZFAND6Q6FIF0 208 aa18.09■□□□□ 0.49
PVT1-204ENST00000517525 ZBTB8BQ8NAP8 495 aaPredicted RBP18.09■□□□□ 0.49
PVT1-204ENST00000517525 RAB40CQ96S21 281 aa18.09■□□□□ 0.49
PVT1-204ENST00000517525 NRN1Q9NPD7 142 aa18.09■□□□□ 0.49
PVT1-204ENST00000517525 PSENENQ9NZ42 101 aa18.09■□□□□ 0.49
PVT1-204ENST00000517525 SLC45A2Q9UMX9 530 aa18.09■□□□□ 0.49
PVT1-204ENST00000517525 CSMD3Q7Z407 3707 aa18.09■□□□□ 0.49
PVT1-204ENST00000517525 PMS2P5A8MQ11 134 aa18.08■□□□□ 0.48
PVT1-204ENST00000517525 TMEM14EPQ6UXP3 125 aa18.08■□□□□ 0.48
PVT1-204ENST00000517525 SIGLEC15Q6ZMC9 328 aa18.08■□□□□ 0.48
PVT1-204ENST00000517525 NUDT15Q9NV35 164 aa18.08■□□□□ 0.48
PVT1-204ENST00000517525 H3BP45 60 aa18.07■□□□□ 0.48
PVT1-204ENST00000517525 ASAH1Q13510 395 aa18.07■□□□□ 0.48
PVT1-204ENST00000517525 LEMD1Q68G75 181 aa18.07■□□□□ 0.48
PVT1-204ENST00000517525 TMEM144Q7Z5S9 345 aa18.07■□□□□ 0.48
PVT1-204ENST00000517525 ZNF431Q8TF32 576 aaPredicted RBP18.07■□□□□ 0.48
PVT1-204ENST00000517525 PTTG2Q9NZH5 202 aa18.07■□□□□ 0.48
PVT1-204ENST00000517525 FBXL17Q9UF56 701 aa18.07■□□□□ 0.48
PVT1-204ENST00000517525 TBC1D24Q9ULP9 559 aa18.07■□□□□ 0.48
PVT1-204ENST00000517525 DYNC2H1Q8NCM8 4307 aaKnown RBP18.07■□□□□ 0.48
PVT1-204ENST00000517525 FNDC10F2Z333 226 aa18.06■□□□□ 0.48
PVT1-204ENST00000517525 TSC22D2O75157 780 aa18.06■□□□□ 0.48
PVT1-204ENST00000517525 ZNF688P0C7X2 276 aa18.06■□□□□ 0.48
PVT1-204ENST00000517525 ACOT7LQ6ZUV0 252 aa18.06■□□□□ 0.48
PVT1-204ENST00000517525 TRPT1Q86TN4 253 aaKnown RBP18.06■□□□□ 0.48
PVT1-204ENST00000517525 PBDC1Q9BVG4 233 aa18.06■□□□□ 0.48
PVT1-204ENST00000517525 TRAV6A0A075B6T7 132 aa18.05■□□□□ 0.48
PVT1-204ENST00000517525 SSSCA1O60232 199 aa18.05■□□□□ 0.48
PVT1-204ENST00000517525 H2AFB2P0C5Z0 115 aa18.05■□□□□ 0.48
PVT1-204ENST00000517525 LYZP61626 148 aa18.05■□□□□ 0.48
PVT1-204ENST00000517525 TMEM41BQ5BJD5 291 aa18.05■□□□□ 0.48
PVT1-204ENST00000517525 MZT2BQ6NZ67 158 aa18.05■□□□□ 0.48
PVT1-204ENST00000517525 STHQ8IWL8 128 aa18.05■□□□□ 0.48
PVT1-204ENST00000517525 WDR12Q9GZL7 423 aaKnown RBP18.05■□□□□ 0.48
PVT1-204ENST00000517525 STARD9Q9P2P6 4700 aa18.05■□□□□ 0.48
PVT1-204ENST00000517525 FAM240BA0A1B0GVZ2 78 aa18.04■□□□□ 0.48
PVT1-204ENST00000517525 SNRPD3P62318 126 aaKnown RBP18.04■□□□□ 0.48
PVT1-204ENST00000517525 DLK1P80370 383 aa18.04■□□□□ 0.48
PVT1-204ENST00000517525 OR2F1Q13607 317 aa18.04■□□□□ 0.48
PVT1-204ENST00000517525 RCL1Q9Y2P8 373 aaKnown RBP18.04■□□□□ 0.48
PVT1-204ENST00000517525 MBPP02686 304 aaPredicted RBP18.03■□□□□ 0.48
PVT1-204ENST00000517525 MORN3Q6PF18 240 aaPredicted RBP18.03■□□□□ 0.48
PVT1-204ENST00000517525 BPIFCQ8NFQ6 507 aa18.03■□□□□ 0.48
PVT1-204ENST00000517525 GSKIPQ9P0R6 139 aa18.03■□□□□ 0.48
PVT1-204ENST00000517525 A0A0J9YWU9 116 aa18.02■□□□□ 0.48
PVT1-204ENST00000517525 IL5P05113 134 aa18.02■□□□□ 0.48
PVT1-204ENST00000517525 SPP1P10451 314 aa18.02■□□□□ 0.48
PVT1-204ENST00000517525 AKR1C1Q04828 323 aa18.02■□□□□ 0.48
PVT1-204ENST00000517525 ZNF846Q147U1 533 aa18.02■□□□□ 0.48
PVT1-204ENST00000517525 C12orf45Q8N5I9 185 aaPredicted RBP18.02■□□□□ 0.48
PVT1-204ENST00000517525 SEC22CQ9BRL7 303 aa18.02■□□□□ 0.48
PVT1-204ENST00000517525 TENM2Q9NT68 2774 aa18.01■□□□□ 0.47
PVT1-204ENST00000517525 K7EPK0 472 aa18.01■□□□□ 0.47
PVT1-204ENST00000517525 UPK1BO75841 260 aa18.01■□□□□ 0.47
PVT1-204ENST00000517525 CA1P00915 261 aaPredicted RBP18.01■□□□□ 0.47
PVT1-204ENST00000517525 GIG44P09565 113 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms