RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 GOLT1AQ6ZVE7 132 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 MIR17HGQ75NE6 70 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 TMED4Q7Z7H5 227 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 TMEM86AQ8N2M4 240 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 RGS12O14924 1447 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 BLMP54132 1417 aaPredicted RBP2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 PXDNLA1KZ92 1463 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 NEXMIFQ5QGS0 1516 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 CLTCL1P53675 1640 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 SHPRHQ149N8 1683 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 RTTNQ86VV8 2226 aa2.3□□□□□ -2.04
HMGB1P47-201ENST00000511281 FN1P02751 2386 aaKnown RBP2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 PCNX2A6NKB5 2137 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 SPHKAPQ2M3C7 1700 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 NALCNQ8IZF0 1738 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 NHSL1Q5SYE7 1610 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 C1orf167Q5SNV9 1468 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 NSD3Q9BZ95 1437 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 ANKRD36BQ8N2N9 1353 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 TRAV4A0A0B4J268 109 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 TRAPPC13A5PLN9 417 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 E5RI56 91 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 METTL15P1P0C7V9 234 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 DEFB103AP81534 67 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 POU6F1Q14863 301 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 NDUFA5Q16718 116 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 RNASE11Q8TAA1 199 aaKnown RBP2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 SLC25A40Q8TBP6 338 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 SLC39A9Q9NUM3 307 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 ERGIC3Q9Y282 383 aa2.29□□□□□ -2.04
HMGB1P47-201ENST00000511281 ADGRB1O14514 1584 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 CDK12Q9NYV4 1490 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 YTHDC2Q9H6S0 1430 aaKnown RBP2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 TRBV19A0A075B6N1 114 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 J3QRK9 145 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 ERP29P30040 261 aaKnown RBP2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 SERPINB9P50453 376 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 RPL19P84098 196 aaKnown RBP2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 KRTAP13-4Q3LI77 160 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 PCOTHQ58A44 107 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 LCA10Q71F78 164 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 LRRC28Q86X40 367 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 DHFR2Q86XF0 187 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 TMEM106AQ96A25 262 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 C8orf4Q9NR00 106 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 PYCARDQ9ULZ3 195 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 BAIAP2Q9UQB8 552 aa2.28□□□□□ -2.04
HMGB1P47-201ENST00000511281 BCL9LQ86UU0 1499 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 PXDNQ92626 1479 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 ZNF106Q9H2Y7 1883 aaKnown RBP2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 CIAO1O76071 339 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 OR5F1O95221 314 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 IGKV1-16P04430 117 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 COX6A1P12074 109 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 CASP1P29466 404 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 YPEL3P61236 119 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 LINC01554Q52M75 96 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 DEFB128Q7Z7B8 93 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 C9orf163Q8N9P6 203 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 TMEM133Q9H2Q1 129 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 CKLFQ9UBR5 152 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 LAMC1P11047 1609 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 TRPM1Q7Z4N2 1603 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 MYH11P35749 1972 aa2.27□□□□□ -2.05
HMGB1P47-201ENST00000511281 TECPR2O15040 1411 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 IBA57-AS1B1ANH7 110 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 HTR1AP08908 422 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 TRGC1P0CF51 173 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 SMIM17P0DL12 118 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 AQP4P55087 323 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 SLC38A11Q08AI6 406 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 TRAPPC6BQ86SZ2 158 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 HIST3H2BBQ8N257 126 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 OR52R1Q8NGF1 315 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 MIXL1Q9H2W2 232 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 LHFPL6Q9Y693 200 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 GLI3P10071 1580 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 CDC42BPGQ6DT37 1551 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 TULP4Q9NRJ4 1543 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 PPLO60437 1756 aa2.26□□□□□ -2.05
HMGB1P47-201ENST00000511281 KIF24Q5T7B8 1368 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 A0A0D9SG52 128 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 TCL1BO95988 128 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 IFNA1P01562 189 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 DEFB132Q7Z7B7 95 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 BPIFA4PQ86YQ2 179 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 CLVS1Q8IUQ0 354 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 SIGLECL1Q8N7X8 197 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 OR8B3Q8NGG8 313 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 KIF1BO60333 1816 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 SCN10AQ9Y5Y9 1956 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 TNS3Q68CZ2 1445 aa2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 EDC4Q6P2E9 1401 aaKnown RBP2.25□□□□□ -2.05
HMGB1P47-201ENST00000511281 USP32Q8NFA0 1604 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 DLC1Q96QB1 1528 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 MEIKINA0A087WXM9 373 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 ZNF737O75373 536 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 S100A4P26447 101 aaKnown RBP2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 EIF2B2P49770 351 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms