RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 NPIPB4C9JG80 1138 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 LIPFP07098 398 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 C1orf53Q5VUE5 145 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 Q6P435 159 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 OR2V2Q96R30 315 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 HIF1ANQ9NWT6 349 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 BOKQ9UMX3 212 aaPredicted RBP5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 TCF19Q9Y242 345 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 ADAMTS20P59510 1910 aa5.89□□□□□ -1.47
LIMCH1-207ENST00000508466 SMAD7O15105 426 aaKnown RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 ARMS2P0C7Q2 107 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 PCOLCEQ15113 449 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 ZADH2Q8N4Q0 377 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 RND1Q92730 232 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 RAB1CQ92928 201 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 C10orf35Q96D05 121 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 APC2O95996 2303 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 TEX50A0A1B0GTY4 177 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 A0A1B0GX78 115 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 J3QR06 171 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 GAS8-AS1O95177 125 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 APOMO95445 188 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 TNFRSF1AP19438 455 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 GPR12P47775 334 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 ZNF134P52741 427 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 PRB3Q04118 309 aaPredicted RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 PEAR1Q5VY43 1037 aaPredicted RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 RUSC1-AS1Q66K80 236 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 C8orf86Q6ZUL3 223 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 NFE4Q86UQ8 179 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 NFAM1Q8NET5 270 aaPredicted RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 GRAMD2BQ96HH9 432 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 ZNF479Q96JC4 524 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 LOC107984156A0A0G2JMH3 177 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 FAM90A26D6RGX4 464 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 CCDC179H3BU77 68 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 P01737 135 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 IFI6P09912 130 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 KLF5Q13887 457 aaPredicted RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 INO80CQ6PI98 192 aaPredicted RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 ZNF497Q6ZNH5 498 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 PRNTQ86SH4 94 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 ARL17AQ8IVW1 177 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 NPIPB3Q92617 1050 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 C11orf52Q96A22 123 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 SPACA9Q96E40 222 aaPredicted RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 DAZAP1Q96EP5 407 aaKnown RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 LOXL2Q9Y4K0 774 aa5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 CHCHD2Q9Y6H1 151 aaPredicted RBP5.88□□□□□ -1.47
LIMCH1-207ENST00000508466 IGHV3OR15-7A0A075B7D8 119 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 TRBV7-9A0A0J9YWB2 115 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 CRXO43186 299 aaPredicted RBP5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 SPINT2O43291 252 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 ZFAND5O76080 213 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 SP9P0CG40 484 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 CT45A6P0DMU7 189 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 CT45A5P0DMU8 189 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 CT45A7P0DMV0 189 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 TBC1D28Q2M2D7 210 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 GAGE13Q4V321 117 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 CT45A1Q5HYN5 189 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 PET117Q6UWS5 81 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 TUSC5Q8IXB3 177 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 FADS6Q8N9I5 356 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 OR5A1Q8NGJ0 315 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 CT45A3Q8NHU0 189 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 SRSF12Q8WXF0 261 aaKnown RBP5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 NDFIP1Q9BT67 221 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 C1QTNF4Q9BXJ3 329 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 PGPEP1Q9NXJ5 209 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 hADV38S2A0JD32 116 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 TMEM213A2RRL7 107 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 PEX7O00628 323 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 CLEC3BP05452 202 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 P0C879 139 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 FAM201AQ5SY85 155 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 LINC01545Q5VT33 79 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 ZFP2Q6ZN57 461 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 PRELID3AQ96N28 172 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 ENY2Q9NPA8 101 aa5.87□□□□□ -1.47
LIMCH1-207ENST00000508466 NCKAP5O14513 1909 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 NPIPB6E9PJ23 425 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 PRTN3P24158 256 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 COL8A1P27658 744 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 C10orf55Q5SWW7 151 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 TMEM160Q9NX00 188 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 MRPL16Q9NX20 251 aaKnown RBP5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 D6R8Y8 96 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 MRPL33O75394 65 aaKnown RBP5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 PRSS1P07477 247 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 EVI2AP22794 236 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 REG1BP48304 166 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 GNG3P63215 75 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 Q6ZS49 121 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 AMN1Q8IY45 258 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 EXOC3-AS1Q8N2X6 119 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 MAPKAPK5-AS1Q8N8E1 139 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 SLC25A33Q9BSK2 321 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 CDIP1Q9H305 208 aa5.86□□□□□ -1.47
LIMCH1-207ENST00000508466 OBP2BQ9NPH6 170 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms