RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 KIAA0040Q15053 153 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF141Q15928 474 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 VMA21Q3ZAQ7 101 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF542PQ5EBM4 170 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 MRPL2Q5T653 305 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 LYRM7Q5U5X0 104 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 LINC01545Q5VT33 79 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 LCN12Q6JVE5 192 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC25A34Q6PIV7 304 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 Q71RC1 249 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 COX8CQ7Z4L0 72 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 RPS19BP1Q86WX3 136 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SGPP2Q8IWX5 399 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 C3orf22Q8N5N4 141 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 CD177Q8N6Q3 437 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZFP41Q8N8Y5 198 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF709Q8N972 641 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 C15orf53Q8NAA6 179 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 APCDD1LQ8NCL9 501 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 OR52P1PQ8NH57 321 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 CMTM2Q8TAZ6 248 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 C18orf32Q8TCD1 76 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 NT5CQ8TCD5 201 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SMIM4Q8WVI0 70 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 PPDPFLQ8WWR9 84 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 GEMIN6Q8WXD5 167 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 DLX4Q92988 240 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 TSACCQ96A04 125 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 MRPL24Q96A35 216 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 RBMXL1Q96E39 390 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 DNAJA3Q96EY1 480 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 PGLYRP3Q96LB9 341 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 LINC00477Q96M19 166 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 LINC01600Q96MT4 127 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 FAM173AQ9BQD7 235 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM59Q9BXS4 323 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 GABARAPL3Q9BY60 117 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SRXN1Q9BYN0 137 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 COMMD5Q9GZQ3 224 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 FXYD6Q9H0Q3 95 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 RNASE7Q9H1E1 156 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 BCL2L10Q9HD36 194 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 PHPT1Q9NRX4 125 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 KCNIP2Q9NS61 270 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ABRACLQ9P1F3 81 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 WRAP73Q9P2S5 460 aaPredicted RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 IL36AQ9UHA7 158 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF257Q9Y2Q1 563 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 SPCS1Q9Y6A9 102 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 ADGRB1O14514 1584 aa1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 BRCA1P38398 1863 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 PDCD11Q14690 1871 aaKnown RBP1.5□□□□□ -2.17
HMGB3P17-201ENST00000504195 RGPD4Q7Z3J3 1758 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 MON2Q7Z3U7 1717 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 RREB1Q92766 1687 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SCN9AQ15858 1988 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV12-2A0A075B6T6 113 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV27A0A087WT01 109 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SMIM26A0A096LP01 95 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 LOC102724200A0A096LPH7 203 aaPredicted RBP1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 TRAV8-6A0A0B4J262 113 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 KNCNA6PVL3 124 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 AGPAT2O15120 278 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 DEDDO75618 318 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 LYPD3O95274 346 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 APOMO95445 188 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 PTHP01270 115 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 RBP4P02753 201 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 MT-ND6P03923 174 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 HLA-DPB1P04440 258 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC25A5P05141 298 aaKnown RBP1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 PYYP10082 97 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 CPMP14384 443 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 HLA-DMBP28068 263 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 PFN2P35080 140 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 OPRM1P35372 400 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 VDAC2P45880 294 aaPredicted RBP1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 GALR1P47211 349 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 PSMB3P49720 205 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 UBE2E1P51965 193 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 ATP5EP56381 51 aaPredicted RBP1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 RBM11P57052 281 aaKnown RBP1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 DAD1P61803 113 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 HBG1P69891 147 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 HBG2P69892 147 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 NDPQ00604 133 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SLC38A11Q08AI6 406 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 DIAPH2-AS1Q14236 149 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF506Q5JVG8 444 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 C9orf153Q5TBE3 101 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 HES3Q5TGS1 186 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 TMEM91Q6ZNR0 172 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 RFLNAQ6ZTI6 216 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 AAED1Q7RTV5 226 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 LHFPL1Q86WI0 220 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 SAXO1Q8IYX7 474 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 ZNF101Q8IZC7 436 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 C10orf126Q8N4M7 172 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 DCAF4L2Q8NA75 395 aa1.49□□□□□ -2.17
HMGB3P17-201ENST00000504195 LY6G5BQ8NDX9 201 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms