RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 APOMO95445 188 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 FOXL1Q12952 345 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 Q6P435 159 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 NUDT10Q8NFP7 164 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 NUDT11Q96G61 164 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 C5orf30Q96GV9 206 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 TRGV9Q99603 122 aa13.6□□□□□ -0.23
PCDHA1-203ENST00000504120 A0A1B0GWJ7 208 aa13.59□□□□□ -0.23
PCDHA1-203ENST00000504120 MBD3L4A6NDZ8 208 aaPredicted RBP13.59□□□□□ -0.23
PCDHA1-203ENST00000504120 MBD3L3A6NE82 208 aaPredicted RBP13.59□□□□□ -0.23
PCDHA1-203ENST00000504120 MBD3L5A6NJ08 208 aaPredicted RBP13.59□□□□□ -0.23
PCDHA1-203ENST00000504120 MBD3L2Q8NHZ7 208 aaPredicted RBP13.59□□□□□ -0.23
PCDHA1-203ENST00000504120 MGST2Q99735 147 aa13.59□□□□□ -0.23
PCDHA1-203ENST00000504120 PSG1P11464 419 aa13.59□□□□□ -0.23
PCDHA1-203ENST00000504120 RPP25LQ8N5L8 163 aaKnown RBP13.59□□□□□ -0.23
PCDHA1-203ENST00000504120 LINC01549A6NIU2 74 aa13.58□□□□□ -0.23
PCDHA1-203ENST00000504120 VMO1Q7Z5L0 202 aa13.58□□□□□ -0.23
PCDHA1-203ENST00000504120 SNRNP200O75643 2136 aaKnown RBP13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 CFAP161Q6P656 301 aa13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 AGMATQ9BSE5 352 aa13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 METRNQ9UJH8 293 aa13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 MDC1Q14676 2089 aaKnown RBP13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 IGHG3P01860 377 aa13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 TDGF1P13385 188 aa13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 SRSF4Q08170 494 aaKnown RBP13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 LY6DQ14210 128 aa13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 SPATA31B1PQ5VZV4 182 aa13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 SLC25A39Q9BZJ4 359 aaPredicted RBP13.58□□□□□ -0.24
PCDHA1-203ENST00000504120 COLCA2A8K830 154 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 C15orf32Q32M92 178 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 PMS2P5A8MQ11 134 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 TSPAN13O95857 204 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 TSC2P49815 1807 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 RBMY1BA6NDE4 496 aaKnown RBP13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 RBMY1EA6NEQ0 496 aaKnown RBP13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 H0YJW9 148 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 CA1P00915 261 aaPredicted RBP13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 RBMY1DP0C7P1 496 aaKnown RBP13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 RBMY1A1P0DJD3 496 aaKnown RBP13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 RBMY1CP0DJD4 496 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 GAFA1Q96PS6 74 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 HIST1H2BLQ99880 126 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 PPIFP30405 207 aaKnown RBP13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 KIF26BQ2KJY2 2108 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 DMRTA1Q5VZB9 504 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 RASL11AQ6T310 242 aa13.57□□□□□ -0.24
PCDHA1-203ENST00000504120 ZNF585BQ52M93 769 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 SPSB3Q6PJ21 355 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 LINC01551Q86U37 167 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 FAM169BQ8N8A8 192 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 SEPSECSQ9HD40 501 aaKnown RBP13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 LINC01559Q495D7 138 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 NPIPB5A8MRT5 1133 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 M0R1W7 72 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 ASCL4Q6XD76 172 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 TRAV3A0A0B4J244 114 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 TRBV7-9A0A0J9YWB2 115 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 LINC00587B1AMM8 73 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 LILRA1O75019 489 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 CXCL1P09341 107 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 LY96Q9Y6Y9 160 aa13.56□□□□□ -0.24
PCDHA1-203ENST00000504120 RNF144BQ7Z419 303 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 GVINP1Q7Z2Y8 2422 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 A0A0G2JNJ9 132 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 Q9UFV3 132 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 HGFACQ04756 655 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 C20orf204Q6ZNR8 217 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 IFI27L1Q96BM0 104 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 SCRT1Q9BWW7 348 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 LINC00473A8K010 186 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 TCRAP04437 139 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 HIST3H2BBQ8N257 126 aa13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 CHTOPQ9Y3Y2 248 aaKnown RBP13.55□□□□□ -0.24
PCDHA1-203ENST00000504120 ARHGEF17Q96PE2 2063 aaPredicted RBP13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 H3BUT2 72 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 IGKCP01834 107 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 ESPL1Q14674 2120 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 LYL1P12980 280 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 HTN3P15516 51 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 SMPXQ9UHP9 88 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 IGKV1D-17A0A075B6S4 117 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 C5orf64Q2M2E5 130 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 C10orf126Q8N4M7 172 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 RNF182Q8N6D2 247 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 SLC25A2Q9BXI2 301 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 IGKV2-40A0A087WW87 121 aaPredicted RBP13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 IGKV2D-40P01614 121 aaPredicted RBP13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 EVI2AP22794 236 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
PCDHA1-203ENST00000504120 Q6ZS92 163 aa13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 EXOC3-AS1Q8N2X6 119 aa13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 BUB1B-PAK6H3BSN5 160 aa13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 CLDN16Q9Y5I7 305 aa13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 TYMSP04818 313 aa13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 CMC4P56277 68 aaPredicted RBP13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 FHL1Q13642 323 aa13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 REG4Q9BYZ8 158 aa13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 NHP2Q9NX24 153 aaKnown RBP13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 PTPRDP23468 1912 aa13.53□□□□□ -0.24
PCDHA1-203ENST00000504120 CFPP27918 469 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms