RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FAM78BQ5VT40 261 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 LY6G5BQ8NDX9 201 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR2D3Q8NGH3 330 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 ASB17Q8WXJ9 295 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 CPNE2Q96FN4 548 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR51I1Q9H343 314 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 TAS2R9Q9NYW1 312 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 MCTS1Q9ULC4 181 aaKnown RBP2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 ERGIC3Q9Y282 383 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 ARL5AQ9Y689 179 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 ZNF407Q9C0G0 2248 aa2.74□□□□□ -1.97
HMGB1P3-201ENST00000502802 ANKRD17O75179 2603 aaKnown RBP2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 DSCAML1Q8TD84 2053 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 HIVEP1P15822 2718 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 HRNRQ86YZ3 2850 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 INTS1Q8N201 2190 aaKnown RBP2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 C2orf74A8MZ97 194 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 CCL22O00626 93 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 NDUFA2O43678 99 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 CTXN2P0C2S0 81 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 ESDP10768 282 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 CBR1P16152 277 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 REG1BP48304 166 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 ZNF140P52738 457 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 TSPEAR-AS2P59090 65 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 SPCS3P61009 180 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 TMED2Q15363 201 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 TAF1AQ15573 450 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 BATFQ16520 125 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 TMEM176BQ3YBM2 270 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 GLT6D1Q7Z4J2 308 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 OOSP2Q86WS3 158 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR1M1Q8NGA1 313 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR4E2Q8NGC2 313 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR13C4Q8NGS5 318 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 CCDC42Q96M95 316 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 TRABDQ9H4I3 376 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 SMDT1Q9H4I9 107 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 FAM96AQ9H5X1 160 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 SNX12Q9UMY4 172 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 LSM5Q9Y4Y9 91 aaKnown RBP2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 SETD2Q9BYW2 2564 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 NINQ8N4C6 2090 aa2.73□□□□□ -1.97
HMGB1P3-201ENST00000502802 MPDZO75970 2070 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 TMED7-TICAM2A0A0A6YYA0 188 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 LOC102725191A0A1B0GVB3 256 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 FUOMA2VDF0 154 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 APOC4-APOC2K7ER74 178 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 TP53I11O14683 189 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 KLF7O75840 302 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 CDS2O95674 445 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 DHFRP00374 187 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 APOC2P02655 101 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 IFNA6P05013 189 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 SLC25A16P16260 332 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 NPPCP23582 126 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 GABRA4P48169 554 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 AP3S2P59780 193 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 EMX1Q04741 257 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 LRRC75BQ2VPJ9 315 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 PLPPR5Q32ZL2 321 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 RASL11AQ6T310 242 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 SBSNQ6UWP8 590 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 C3orf62Q6ZUJ4 267 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 SMIM15Q7Z3B0 74 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 MSRB3Q8IXL7 192 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 FDCSPQ8NFU4 85 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR11H1Q8NG94 326 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 OR10A6Q8NH74 314 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 GPR119Q8TDV5 335 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 LCN9Q8WX39 176 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 LCE3DQ9BYE3 92 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 NKX6-2Q9C056 277 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 C11orf1Q9H5F2 150 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 NCKAP5O14513 1909 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 VPS13CQ709C8 3753 aa2.72□□□□□ -1.97
HMGB1P3-201ENST00000502802 CCDC168Q8NDH2 2452 aa2.71□□□□□ -1.97
HMGB1P3-201ENST00000502802 AKAP6Q13023 2319 aa2.71□□□□□ -1.97
HMGB1P3-201ENST00000502802 SPG11Q96JI7 2443 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 ITPR3Q14573 2671 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 F8P00451 2351 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 ZFHX3Q15911 3703 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 DHRS12A0PJE2 317 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 OR51F1A6NGY5 319 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 E7EQ34 232 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 NOS1APO75052 506 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 IFNA16P05015 189 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 FABP1P07148 127 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 PEBP1P30086 187 aaKnown RBP2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 RAB5BP61020 215 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 HOXC5Q00444 222 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 POU6F1Q14863 301 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 HIST3H3Q16695 136 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 DEFB110Q30KQ9 67 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 C1orf194Q5T5A4 169 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 SFXN4Q6P4A7 337 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 HIST2H3AQ71DI3 136 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 ZNF550Q7Z398 422 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 OR10D4PQ8NGN7 298 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 OR4K13Q8NH42 304 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms