RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 ANKRD55Q3KP44 614 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 OGFRL1Q5TC84 451 aaPredicted RBP4.06□□□□□ -1.76
SPTA1-209ENST00000498708 OR8G2PQ6IF36 304 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 OR4A47Q6IF82 309 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 LPCAT3Q6P1A2 487 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 PLET1Q6UQ28 207 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 COMMD7Q86VX2 200 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 APRG1Q8IVJ8 170 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 PUSL1Q8N0Z8 303 aaKnown RBP4.06□□□□□ -1.76
SPTA1-209ENST00000498708 UBAC2Q8NBM4 344 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 OR4S2Q8NH73 311 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 TMEM167AQ8TBQ9 72 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 NUDCD2Q8WVJ2 157 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 SECTM1Q8WVN6 248 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 ST6GAL2Q96JF0 529 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 C20orf24Q9BUV8 137 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 HINT2Q9BX68 163 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 HRASLSQ9HDD0 168 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 CCL28Q9NRJ3 127 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 SLC2A9Q9NRM0 540 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 MRPL27Q9P0M9 148 aaKnown RBP4.06□□□□□ -1.76
SPTA1-209ENST00000498708 TPRKBQ9Y3C4 175 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 OR2W1Q9Y3N9 320 aa4.06□□□□□ -1.76
SPTA1-209ENST00000498708 IGLV11-55A0A075B6I3 123 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 IGHV3OR16-13A0A075B7E8 117 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 IGHV3-74A0A0B4J1X5 117 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 TMEM235A6NFC5 223 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 FABP12A6NFH5 140 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 OR2T8A6NH00 312 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 A8MWP6 167 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 DNASE2O00115 360 aaPredicted RBP4.05□□□□□ -1.76
SPTA1-209ENST00000498708 TGOLN2O43493 480 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 UPK1BO75841 260 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 IGLV2-14P01704 120 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 RLN2P04090 185 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 CTSDP07339 412 aaPredicted RBP4.05□□□□□ -1.76
SPTA1-209ENST00000498708 HIST1H1BP16401 226 aaKnown RBP4.05□□□□□ -1.76
SPTA1-209ENST00000498708 HLA-GP17693 338 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 RAB3BP20337 219 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 MYL9P24844 172 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 GNRHRP30968 328 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 CCR6P51684 374 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 BRWD1-AS2P59051 145 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 FXYD4P59646 89 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 RAB5BP61020 215 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 RPL8P62917 257 aaKnown RBP4.05□□□□□ -1.76
SPTA1-209ENST00000498708 MLLT11Q13015 90 aaPredicted RBP4.05□□□□□ -1.76
SPTA1-209ENST00000498708 ARL6IP1Q15041 203 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 TRAM1Q15629 374 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 VAMP3Q15836 100 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 ODF3L2Q3SX64 289 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 TCF24Q7RTU0 167 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 OR10W1Q8NGF6 305 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 VSTM2AQ8TAG5 236 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 ZNF502Q8TBZ5 544 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 SAT2Q96F10 170 aaPredicted RBP4.05□□□□□ -1.76
SPTA1-209ENST00000498708 NARS2Q96I59 477 aaKnown RBP4.05□□□□□ -1.76
SPTA1-209ENST00000498708 C18orf15Q96N68 181 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 RNF2Q99496 336 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 MGLLQ99685 303 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 ALKBH7Q9BT30 221 aaPredicted RBP4.05□□□□□ -1.76
SPTA1-209ENST00000498708 TMEM208Q9BTX3 173 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 DCSTAMPQ9H295 470 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 APLNQ9ULZ1 77 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 UFC1Q9Y3C8 167 aa4.05□□□□□ -1.76
SPTA1-209ENST00000498708 TRBV7-1A0A0A6YYK4 115 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 RPS10-NUDT3A0A1W2PQS6 291 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 IFITM5A6NNB3 132 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 EPM2AB3EWF7 344 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 K7EQM0 130 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 HRASP01112 189 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 C8orf88P0DMB2 117 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 C4BPBP20851 252 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 PSMA1P25786 263 aaKnown RBP4.04□□□□□ -1.76
SPTA1-209ENST00000498708 FCGR2CP31995 323 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 AQP4P55087 323 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 RAB11AP62491 216 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 SSX1Q16384 188 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 TIMM50Q3ZCQ8 353 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 Q56UQ5 140 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 CST9LP1Q5W188 147 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 LEMD1Q68G75 181 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 LAMTOR1Q6IAA8 161 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 C22orf42Q6IC83 251 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 CNIH2Q6PI25 160 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 Q6ZWC4 215 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 HSD17B13Q7Z5P4 300 aaPredicted RBP4.04□□□□□ -1.76
SPTA1-209ENST00000498708 NR2C2APQ86WQ0 139 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 GBGT1Q8N5D6 347 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 OR51H1Q8NH63 302 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 DEDD2Q8WXF8 326 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 CXorf58Q96LI9 332 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 HYLS1Q96M11 299 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 HSD17B10Q99714 261 aaKnown RBP4.04□□□□□ -1.76
SPTA1-209ENST00000498708 SPAG8Q99932 426 aaPredicted RBP4.04□□□□□ -1.76
SPTA1-209ENST00000498708 RARRES2Q99969 163 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 CHRDL1Q9BU40 450 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 NDUFAF3Q9BU61 184 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 COMMD5Q9GZQ3 224 aa4.04□□□□□ -1.76
SPTA1-209ENST00000498708 MAP6D1Q9H9H5 199 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms