RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 RETNQ9HD89 108 aa12.44□□□□□ -0.42
ABCF3-218ENST00000498136 HUWE1Q7Z6Z7 4374 aaKnown RBP12.43□□□□□ -0.42
ABCF3-218ENST00000498136 C5orf51A6NDU8 294 aa12.43□□□□□ -0.42
ABCF3-218ENST00000498136 FABP1P07148 127 aa12.43□□□□□ -0.42
ABCF3-218ENST00000498136 EIF2B2P49770 351 aaKnown RBP12.43□□□□□ -0.42
ABCF3-218ENST00000498136 CMC4P56277 68 aaPredicted RBP12.43□□□□□ -0.42
ABCF3-218ENST00000498136 ZNF90Q03938 601 aa12.43□□□□□ -0.42
ABCF3-218ENST00000498136 USF2Q15853 346 aaPredicted RBP12.43□□□□□ -0.42
ABCF3-218ENST00000498136 OR8G2PQ6IF36 304 aa12.43□□□□□ -0.42
ABCF3-218ENST00000498136 APRG1Q8IVJ8 170 aa12.43□□□□□ -0.42
ABCF3-218ENST00000498136 C12orf45Q8N5I9 185 aaPredicted RBP12.43□□□□□ -0.42
ABCF3-218ENST00000498136 STXBP6Q8NFX7 210 aa12.43□□□□□ -0.42
ABCF3-218ENST00000498136 SMCO3A2RU48 225 aa12.42□□□□□ -0.42
ABCF3-218ENST00000498136 AKR1C1Q04828 323 aa12.42□□□□□ -0.42
ABCF3-218ENST00000498136 RNF125Q96EQ8 232 aa12.42□□□□□ -0.42
ABCF3-218ENST00000498136 FAM110AQ9BQ89 295 aa12.42□□□□□ -0.42
ABCF3-218ENST00000498136 IGKV1D-37A0A075B6S9 117 aa12.41□□□□□ -0.42
ABCF3-218ENST00000498136 LYZP61626 148 aa12.41□□□□□ -0.42
ABCF3-218ENST00000498136 OR2F1Q13607 317 aa12.41□□□□□ -0.42
ABCF3-218ENST00000498136 SMIM8Q96KF7 97 aa12.41□□□□□ -0.42
ABCF3-218ENST00000498136 RAB40CQ96S21 281 aa12.41□□□□□ -0.42
ABCF3-218ENST00000498136 MAP6D1Q9H9H5 199 aa12.41□□□□□ -0.42
ABCF3-218ENST00000498136 HELTA6NFD8 242 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 PRSS46E5RG02 174 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 MBPP02686 304 aaPredicted RBP12.4□□□□□ -0.42
ABCF3-218ENST00000498136 RPL35AP18077 110 aaKnown RBP12.4□□□□□ -0.42
ABCF3-218ENST00000498136 APOC4P55056 127 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 IFITM3Q01628 133 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 ZNF124Q15973 351 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 C16orf54Q6UWD8 224 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 ACOT7LQ6ZUV0 252 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 PPP1R14BQ96C90 147 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 TRGV9Q99603 122 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 PFDN2Q9UHV9 154 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 RCL1Q9Y2P8 373 aaKnown RBP12.4□□□□□ -0.42
ABCF3-218ENST00000498136 LSM5Q9Y4Y9 91 aaKnown RBP12.4□□□□□ -0.42
ABCF3-218ENST00000498136 U3KQE9 123 aa12.4□□□□□ -0.42
ABCF3-218ENST00000498136 IGKV1OR2-108A0A075B7D4 117 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 TRAV2A0A0B4J234 112 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 SNRPGP15A8MWD9 76 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 L7N2F9 121 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 METTL15P1P0C7V9 234 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 AP2S1P53680 142 aaPredicted RBP12.39□□□□□ -0.43
ABCF3-218ENST00000498136 PAX9P55771 341 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 DEFA1P59665 94 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 DEFA3P59666 94 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 RRAS2P62070 204 aaPredicted RBP12.39□□□□□ -0.43
ABCF3-218ENST00000498136 VAMP2P63027 116 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 GSG1LQ6UXU4 331 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 THAP8Q8NA92 274 aa12.39□□□□□ -0.43
ABCF3-218ENST00000498136 GPN1Q9HCN4 374 aaPredicted RBP12.39□□□□□ -0.43
ABCF3-218ENST00000498136 TSC22D2O75157 780 aa12.38□□□□□ -0.43
ABCF3-218ENST00000498136 IL5P05113 134 aa12.38□□□□□ -0.43
ABCF3-218ENST00000498136 NUP62P37198 522 aaPredicted RBP12.38□□□□□ -0.43
ABCF3-218ENST00000498136 TAS2R30P59541 319 aa12.38□□□□□ -0.43
ABCF3-218ENST00000498136 DEFB131AP59861 70 aa12.38□□□□□ -0.43
ABCF3-218ENST00000498136 SIGLEC15Q6ZMC9 328 aa12.38□□□□□ -0.43
ABCF3-218ENST00000498136 NRARPQ7Z6K4 114 aa12.38□□□□□ -0.43
ABCF3-218ENST00000498136 OR10P1Q8NGE3 313 aa12.38□□□□□ -0.43
ABCF3-218ENST00000498136 GLMPQ8WWB7 406 aa12.38□□□□□ -0.43
ABCF3-218ENST00000498136 BUB3O43684 328 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 CCNKO75909 580 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 BCAP31P51572 246 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 S100A10P60903 97 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 LEMD1Q68G75 181 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 TMEM14EPQ6UXP3 125 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 FAM24BQ8N5W8 94 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 STPG3Q8N7X2 389 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 BPIFCQ8NFQ6 507 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 C2orf50Q96LR7 162 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 MGAT4CQ9UBM8 478 aa12.37□□□□□ -0.43
ABCF3-218ENST00000498136 TENM3Q9P273 2699 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 C7orf66A4D0T2 115 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 INMT-MINDY4F8WBC2 141 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 K7EPK0 472 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 K7EQG2 157 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 CFDP00746 253 aaPredicted RBP12.36□□□□□ -0.43
ABCF3-218ENST00000498136 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 DLK1P80370 383 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 TMEM144Q7Z5S9 345 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 MUC7Q8TAX7 377 aa12.36□□□□□ -0.43
ABCF3-218ENST00000498136 KIR2DL5BA0A0G2JN68 375 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 KIR2DL5BA0A0G2JPC4 375 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 PMS2P5A8MQ11 134 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 UBE2CO00762 179 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 ORM2P19652 201 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 PVALBP20472 110 aaPredicted RBP12.35□□□□□ -0.43
ABCF3-218ENST00000498136 GATA2P23769 480 aaPredicted RBP12.35□□□□□ -0.43
ABCF3-218ENST00000498136 CAV2P51636 162 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 DEFB135Q30KP9 77 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 STHQ8IWL8 128 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 KIR2DL5AQ8N109 375 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 KIR2DL5BQ8NHK3 375 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 DCANP1Q8TF63 244 aa12.35□□□□□ -0.43
ABCF3-218ENST00000498136 STAB2Q8WWQ8 2551 aa12.34□□□□□ -0.43
ABCF3-218ENST00000498136 C3orf84H3BNL1 204 aa12.34□□□□□ -0.43
ABCF3-218ENST00000498136 GOSR2O14653 212 aa12.34□□□□□ -0.43
ABCF3-218ENST00000498136 PRAF2O60831 178 aa12.34□□□□□ -0.43
ABCF3-218ENST00000498136 CYP2G1PQ6ZSU1 146 aa12.34□□□□□ -0.43
ABCF3-218ENST00000498136 OR1B1Q8NGR6 318 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms