RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 LILRB2Q8N423 598 aa14.63□□□□□ -0.07
HDAC4-212ENST00000495497 OR11H7Q8NGC8 314 aa14.63□□□□□ -0.07
HDAC4-212ENST00000495497 ST8SIA2Q92186 375 aa14.63□□□□□ -0.07
HDAC4-212ENST00000495497 RNF2Q99496 336 aa14.63□□□□□ -0.07
HDAC4-212ENST00000495497 NPPCP23582 126 aa14.62□□□□□ -0.07
HDAC4-212ENST00000495497 USF2Q15853 346 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-212ENST00000495497 TMEM182Q6ZP80 229 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-212ENST00000495497 TMEM252Q8N6L7 170 aa14.62□□□□□ -0.07
HDAC4-212ENST00000495497 TMEM217Q8N7C4 229 aa14.62□□□□□ -0.07
HDAC4-212ENST00000495497 OR51G1Q8NGK1 321 aa14.62□□□□□ -0.07
HDAC4-212ENST00000495497 TRGV9Q99603 122 aa14.62□□□□□ -0.07
HDAC4-212ENST00000495497 GATA2P23769 480 aaPredicted RBP14.61□□□□□ -0.07
HDAC4-212ENST00000495497 SLC38A11Q08AI6 406 aa14.61□□□□□ -0.07
HDAC4-212ENST00000495497 RBPMS2Q6ZRY4 209 aaKnown RBP14.61□□□□□ -0.07
HDAC4-212ENST00000495497 TMEM144Q7Z5S9 345 aa14.61□□□□□ -0.07
HDAC4-212ENST00000495497 METTL26Q96S19 204 aa14.61□□□□□ -0.07
HDAC4-212ENST00000495497 RNF126Q9BV68 326 aa14.61□□□□□ -0.07
HDAC4-212ENST00000495497 PBDC1Q9BVG4 233 aa14.61□□□□□ -0.07
HDAC4-212ENST00000495497 LSM4Q9Y4Z0 139 aaKnown RBP14.61□□□□□ -0.07
HDAC4-212ENST00000495497 E5RGE8 158 aa14.6□□□□□ -0.07
HDAC4-212ENST00000495497 MPC2O95563 127 aa14.6□□□□□ -0.07
HDAC4-212ENST00000495497 CRYBB3P26998 211 aa14.6□□□□□ -0.07
HDAC4-212ENST00000495497 SULT1A1P50225 295 aa14.6□□□□□ -0.07
HDAC4-212ENST00000495497 Q8N1Y9 231 aa14.6□□□□□ -0.07
HDAC4-212ENST00000495497 RNF125Q96EQ8 232 aa14.6□□□□□ -0.07
HDAC4-212ENST00000495497 VSIRQ9H7M9 311 aa14.6□□□□□ -0.07
HDAC4-212ENST00000495497 NPVFQ9HCQ7 196 aa14.6□□□□□ -0.07
HDAC4-212ENST00000495497 IGKV3-7A0A075B6H7 116 aa14.59□□□□□ -0.07
HDAC4-212ENST00000495497 HNRNPCP07910 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
HDAC4-212ENST00000495497 LYZP61626 148 aa14.59□□□□□ -0.07
HDAC4-212ENST00000495497 NHLH2Q02577 135 aa14.59□□□□□ -0.07
HDAC4-212ENST00000495497 TRAV25A0A0B4J276 109 aa14.58□□□□□ -0.08
HDAC4-212ENST00000495497 DFFBO76075 338 aa14.58□□□□□ -0.08
HDAC4-212ENST00000495497 FABP1P07148 127 aa14.58□□□□□ -0.08
HDAC4-212ENST00000495497 CD7P09564 240 aa14.58□□□□□ -0.08
HDAC4-212ENST00000495497 P2RY1P47900 373 aa14.58□□□□□ -0.08
HDAC4-212ENST00000495497 LAMTOR1Q6IAA8 161 aa14.58□□□□□ -0.08
HDAC4-212ENST00000495497 STX12Q86Y82 276 aa14.58□□□□□ -0.08
HDAC4-212ENST00000495497 GGACTQ9BVM4 153 aa14.58□□□□□ -0.08
HDAC4-212ENST00000495497 SORL1Q92673 2214 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 FNDC10F2Z333 226 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 TSPAN4O14817 238 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 CD81P60033 236 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 EWSR1Q01844 656 aaKnown RBP eCLIP14.57□□□□□ -0.08
HDAC4-212ENST00000495497 FAM90A2PQ658T7 463 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 CYP2G1PQ6ZSU1 146 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 TCF24Q7RTU0 167 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 MBD2Q9UBB5 411 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 RABAC1Q9UI14 185 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 U3KQE9 123 aa14.57□□□□□ -0.08
HDAC4-212ENST00000495497 S100A11P31949 105 aa14.56□□□□□ -0.08
HDAC4-212ENST00000495497 TFPI2P48307 235 aa14.56□□□□□ -0.08
HDAC4-212ENST00000495497 TEPPQ6URK8 271 aa14.56□□□□□ -0.08
HDAC4-212ENST00000495497 GTSCR1Q86UQ5 136 aa14.56□□□□□ -0.08
HDAC4-212ENST00000495497 GBGT1Q8N5D6 347 aa14.56□□□□□ -0.08
HDAC4-212ENST00000495497 STPG3Q8N7X2 389 aa14.56□□□□□ -0.08
HDAC4-212ENST00000495497 NEURL2Q9BR09 285 aa14.56□□□□□ -0.08
HDAC4-212ENST00000495497 DNAH9Q9NYC9 4486 aa14.55□□□□□ -0.08
HDAC4-212ENST00000495497 A0A1W2PS18 150 aa14.55□□□□□ -0.08
HDAC4-212ENST00000495497 BMI1P35226 326 aa14.55□□□□□ -0.08
HDAC4-212ENST00000495497 EIF2B2P49770 351 aaKnown RBP14.55□□□□□ -0.08
HDAC4-212ENST00000495497 BPIFCQ8NFQ6 507 aa14.55□□□□□ -0.08
HDAC4-212ENST00000495497 NARS2Q96I59 477 aaKnown RBP14.55□□□□□ -0.08
HDAC4-212ENST00000495497 SLC25A31Q9H0C2 315 aa14.55□□□□□ -0.08
HDAC4-212ENST00000495497 WFDC10AQ9H1F0 79 aa14.55□□□□□ -0.08
HDAC4-212ENST00000495497 UQCC1Q9NVA1 299 aa14.55□□□□□ -0.08
HDAC4-212ENST00000495497 SMAD5-AS1Q9Y6J3 95 aa14.55□□□□□ -0.08
HDAC4-212ENST00000495497 PET100P0DJ07 73 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 ORM2P19652 201 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 RPL11P62913 178 aaKnown RBP14.54□□□□□ -0.08
HDAC4-212ENST00000495497 HBG1P69891 147 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 HBG2P69892 147 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 Q5BKY6 102 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 C16orf54Q6UWD8 224 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 WFDC3Q8IUB2 231 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 OR5C1Q8NGR4 320 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 MGST2Q99735 147 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 SPAG8Q99932 426 aaPredicted RBP14.54□□□□□ -0.08
HDAC4-212ENST00000495497 TMEM147Q9BVK8 224 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 TMEM231Q9H6L2 316 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 DOK5Q9P104 306 aa14.54□□□□□ -0.08
HDAC4-212ENST00000495497 UBE2L5PA0A1B0GUS4 154 aa14.53□□□□□ -0.08
HDAC4-212ENST00000495497 AGPAT2O15120 278 aa14.53□□□□□ -0.08
HDAC4-212ENST00000495497 BUB3O43684 328 aa14.53□□□□□ -0.08
HDAC4-212ENST00000495497 VWC2Q2TAL6 325 aa14.53□□□□□ -0.08
HDAC4-212ENST00000495497 DEFB125Q8N687 156 aa14.53□□□□□ -0.08
HDAC4-212ENST00000495497 OR1B1Q8NGR6 318 aa14.53□□□□□ -0.08
HDAC4-212ENST00000495497 GRAMD2BQ96HH9 432 aa14.53□□□□□ -0.08
HDAC4-212ENST00000495497 UBQLN2Q9UHD9 624 aa14.53□□□□□ -0.08
HDAC4-212ENST00000495497 CFDP00746 253 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-212ENST00000495497 GIPP09681 153 aaPredicted RBP14.52□□□□□ -0.09
HDAC4-212ENST00000495497 LINC00869P0C866 280 aa14.52□□□□□ -0.09
HDAC4-212ENST00000495497 IGHV4-30-4P0DP06 118 aa14.52□□□□□ -0.09
HDAC4-212ENST00000495497 LYL1P12980 280 aa14.52□□□□□ -0.09
HDAC4-212ENST00000495497 RPL12P30050 165 aaKnown RBP14.52□□□□□ -0.09
HDAC4-212ENST00000495497 CLINT1Q14677 625 aa14.52□□□□□ -0.09
HDAC4-212ENST00000495497 ATP6V1FQ16864 119 aa14.52□□□□□ -0.09
HDAC4-212ENST00000495497 THAP6Q8TBB0 222 aa14.52□□□□□ -0.09
HDAC4-212ENST00000495497 CHAC2Q8WUX2 184 aa14.52□□□□□ -0.09
HDAC4-212ENST00000495497 GLMPQ8WWB7 406 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms