RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 MCFD2Q8NI22 146 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 ARL5BQ96KC2 179 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 Q96M85 177 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 EFCAB1Q9HAE3 211 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 XPNPEP1Q9NQW7 623 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 UGGT1Q9NYU2 1555 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 IL36BQ9NZH7 164 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 ABCC1P33527 1531 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 AKAP11Q9UKA4 1901 aa0.68□□□□□ -2.3
ITGB1-216ENST00000493758 HECW1Q76N89 1606 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.67□□□□□ -2.31e-6■■□□□ 14.5
ITGB1-216ENST00000493758 A2ML1A8K2U0 1454 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 LRRC37A2A6NM11 1700 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 PRDM2Q13029 1718 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 QSER1Q2KHR3 1735 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 ANKRD26Q9UPS8 1709 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 DNMBPQ6XZF7 1577 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 DIP2CQ9Y2E4 1556 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 ASXL3Q9C0F0 2248 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 A0A0J9YY10 115 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 A0A1B0GX78 115 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 TRAPPC13A5PLN9 417 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 FABP5P3A8MUU1 101 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 EEF1E1-BLOC1S5C9J1V9 151 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 PSMD12O00232 456 aaPredicted RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 NIPSNAP2O75323 286 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 PRM2P04554 102 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 METTL15P1P0C7V9 234 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 CD79AP11912 226 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 IL9P15248 144 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 RPS4Y1P22090 263 aaKnown RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 NKX2-5P52952 324 aaPredicted RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 FXYD2P54710 66 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 SPCS3P61009 180 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 CCL20P78556 96 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 IFITM2Q01629 132 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 PMAIP1Q13794 54 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 GUK1Q16774 197 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 Q1T7F1 81 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 DEFB115Q30KQ5 88 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 IBA57Q5T440 356 aaKnown RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 C8orf74Q6P047 294 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 SFXN4Q6P4A7 337 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 Q6ZS49 121 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 FP248Q71RG6 208 aaPredicted RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 IQCF2Q8IXL9 164 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 OR8B3Q8NGG8 313 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 SLC35B4Q969S0 331 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 IMP4Q96G21 291 aaKnown RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 OR8D2Q9GZM6 311 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 WDR61Q9GZS3 305 aaKnown RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 MED9Q9NWA0 146 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 NOSIPQ9Y314 301 aaKnown RBP0.67□□□□□ -2.3
ITGB1-216ENST00000493758 PLCH1Q4KWH8 1693 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 EFCAB5A4FU69 1503 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 SLIT1O75093 1534 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 LMTK2Q8IWU2 1503 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 UHRF1BP1LA0JNW5 1464 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 CCDC88BA6NC98 1476 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 PZPP20742 1482 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 NRAPQ86VF7 1730 aa0.67□□□□□ -2.3
ITGB1-216ENST00000493758 DIDO1Q9BTC0 2240 aaKnown RBP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 ARHGEF5Q12774 1597 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 PEG3Q9GZU2 1588 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 STAB2Q8WWQ8 2551 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 TECTAO75443 2155 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 CLTCQ00610 1675 aaKnown RBP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 WRNQ14191 1432 aaPredicted RBP eCLIP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 ANK3Q12955 4377 aaKnown RBP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 LTN1O94822 1766 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 N4BP2Q86UW6 1770 aaPredicted RBP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 ATP7AQ04656 1500 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 NEXMIFQ5QGS0 1516 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 ASXL1Q8IXJ9 1541 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 WNK1Q9H4A3 2382 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 IGKV3-7A0A075B6H7 116 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 IBA57-AS1B1ANH7 110 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 INMT-MINDY4F8WBC2 141 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 TRAPPC2LH3BP13 241 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 AHSA1O95433 338 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 UBBP0CG47 229 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 HIST1H1EP10412 219 aaKnown RBP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 SULT1A1P50225 295 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 CEBPGP53567 150 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 PSME3P61289 254 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 STX5Q13190 355 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 OR2F1Q13607 317 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 AADACL3Q5VUY0 350 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 RPL22L1Q6P5R6 122 aaKnown RBP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 AAED1Q7RTV5 226 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 DHFR2Q86XF0 187 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 C20orf196Q8IYI0 205 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 WFDC11Q8NEX6 87 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 MRPL30Q8TCC3 161 aaKnown RBP0.66□□□□□ -2.3
ITGB1-216ENST00000493758 C11orf40Q8WZ69 217 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 TMEM106AQ96A25 262 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 OR52E6Q96RD3 313 aa0.66□□□□□ -2.3
ITGB1-216ENST00000493758 ADAT1Q9BUB4 502 aaKnown RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms