RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 NPPCP23582 126 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 SELENOTP62341 195 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 EWSR1Q01844 656 aaKnown RBP eCLIP12.1□□□□□ -0.47
HDAC7-224ENST00000488927 RAB31Q13636 194 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 DEFB114Q30KQ6 69 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 ADAMTSL5Q6ZMM2 481 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 TMEM231Q9H6L2 316 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 UQCC1Q9NVA1 299 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 SMPXQ9UHP9 88 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 PFDN2Q9UHV9 154 aa12.1□□□□□ -0.47
HDAC7-224ENST00000488927 A0A1W2PS18 150 aa12.09□□□□□ -0.47
HDAC7-224ENST00000488927 ZNF207O43670 478 aaKnown RBP12.09□□□□□ -0.47
HDAC7-224ENST00000488927 NUP62P37198 522 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-224ENST00000488927 ZNF90Q03938 601 aa12.09□□□□□ -0.47
HDAC7-224ENST00000488927 VWC2Q2TAL6 325 aa12.09□□□□□ -0.47
HDAC7-224ENST00000488927 BPIFCQ8NFQ6 507 aa12.09□□□□□ -0.47
HDAC7-224ENST00000488927 RNF125Q96EQ8 232 aa12.09□□□□□ -0.47
HDAC7-224ENST00000488927 ZNF256Q9Y2P7 627 aaPredicted RBP12.09□□□□□ -0.47
HDAC7-224ENST00000488927 TRAV25A0A0B4J276 109 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 WI2-2373I1.2A0A1W2PRP0 233 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 CRYBB3P26998 211 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 RPL12P30050 165 aaKnown RBP12.08□□□□□ -0.48
HDAC7-224ENST00000488927 S100A7P31151 101 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 KRTAP10-11P60412 298 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 CD300EQ496F6 205 aaPredicted RBP12.08□□□□□ -0.48
HDAC7-224ENST00000488927 LAMTOR1Q6IAA8 161 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 BTNL8Q6UX41 500 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 Q6ZNX1 250 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 OR2T35Q8NGX2 323 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 RHPN1-AS1Q9BWJ2 59 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 MLXQ9UH92 298 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 RABAC1Q9UI14 185 aa12.08□□□□□ -0.48
HDAC7-224ENST00000488927 LSM4Q9Y4Z0 139 aaKnown RBP12.08□□□□□ -0.48
HDAC7-224ENST00000488927 FBN3Q75N90 2809 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 NOTCH1P46531 2555 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 CHEK1O14757 476 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 MPDU1O75352 247 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 HNRNPCP07910 306 aaKnown RBP eCLIP12.07□□□□□ -0.48
HDAC7-224ENST00000488927 EDN2P20800 178 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 NHLH2Q02577 135 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 RBPMS2Q6ZRY4 209 aaKnown RBP12.07□□□□□ -0.48
HDAC7-224ENST00000488927 CYP2G1PQ6ZSU1 146 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 ZNF546Q86UE3 836 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 OR5C1Q8NGR4 320 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 GRAMD2BQ96HH9 432 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 HSPB11Q9Y547 144 aa12.07□□□□□ -0.48
HDAC7-224ENST00000488927 EIF2B2P49770 351 aaKnown RBP12.06□□□□□ -0.48
HDAC7-224ENST00000488927 LYZP61626 148 aa12.06□□□□□ -0.48
HDAC7-224ENST00000488927 OR2F1Q13607 317 aa12.06□□□□□ -0.48
HDAC7-224ENST00000488927 USF2Q15853 346 aaPredicted RBP12.06□□□□□ -0.48
HDAC7-224ENST00000488927 S100A7AQ86SG5 101 aa12.06□□□□□ -0.48
HDAC7-224ENST00000488927 PBDC1Q9BVG4 233 aa12.06□□□□□ -0.48
HDAC7-224ENST00000488927 VSIRQ9H7M9 311 aa12.06□□□□□ -0.48
HDAC7-224ENST00000488927 SLC45A2Q9UMX9 530 aa12.06□□□□□ -0.48
HDAC7-224ENST00000488927 WDR83OSQ9Y284 106 aa12.06□□□□□ -0.48
HDAC7-224ENST00000488927 DNAH3Q8TD57 4116 aa12.05□□□□□ -0.48
HDAC7-224ENST00000488927 UBE2L5PA0A1B0GUS4 154 aa12.05□□□□□ -0.48
HDAC7-224ENST00000488927 DFFBO76075 338 aa12.05□□□□□ -0.48
HDAC7-224ENST00000488927 GP9P14770 177 aa12.05□□□□□ -0.48
HDAC7-224ENST00000488927 PXDC1Q5TGL8 231 aa12.05□□□□□ -0.48
HDAC7-224ENST00000488927 AURKAIP1Q9NWT8 199 aaPredicted RBP12.05□□□□□ -0.48
HDAC7-224ENST00000488927 TSPAN4O14817 238 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 AGPAT2O15120 278 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 CAMLGP49069 296 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 DEFA6Q01524 100 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 TMEM61Q8N0U2 210 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 INO80EQ8NBZ0 244 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-224ENST00000488927 CHAC2Q8WUX2 184 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 ST8SIA2Q92186 375 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 AQP10Q96PS8 301 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 RNF2Q99496 336 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 ATP5SQ99766 215 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 SPAG8Q99932 426 aaPredicted RBP12.04□□□□□ -0.48
HDAC7-224ENST00000488927 U3KQE9 123 aa12.04□□□□□ -0.48
HDAC7-224ENST00000488927 IGHV3-49A0A0A0MS15 119 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 LINC00869P0C866 280 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 PLP1P60201 277 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 CLINT1Q14677 625 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 GUCA2BQ16661 112 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 GTSCR1Q86UQ5 136 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 MGST2Q99735 147 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 KCNIP2Q9NS61 270 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 RNF24Q9Y225 148 aa12.03□□□□□ -0.48
HDAC7-224ENST00000488927 IGHV3OR16-13A0A075B7E8 117 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 FXYD6-FXYD2A0A087WZ82 144 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 IGHV3-74A0A0B4J1X5 117 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 IZUMO1RA6ND01 250 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 HELTA6NFD8 242 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 BUB3O43684 328 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 HYPMO75409 117 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 IFNA5P01569 189 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 APOHP02749 345 aaPredicted RBP12.02□□□□□ -0.49
HDAC7-224ENST00000488927 ORM2P19652 201 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 FGF7P21781 194 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 GATA2P23769 480 aaPredicted RBP12.02□□□□□ -0.49
HDAC7-224ENST00000488927 AP2S1P53680 142 aaPredicted RBP12.02□□□□□ -0.49
HDAC7-224ENST00000488927 PAFAH1B2P68402 229 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 Q5BKY6 102 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 C1orf194Q5T5A4 169 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms