RNA–Protein interactions for RNA: ENST00000487445.6

GCA-210, Transcript of grancalcin, humanhuman

TSL 5

Gene GCA, Length 1,808 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-210ENST00000487445 TGOLN2O43493 480 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 NDUFA7O95182 113 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 TRBV12-3P01733 135 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 OR5G3P0C626 314 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 ARL3P36405 182 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 LYZP61626 148 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 KIAA0141Q14154 515 aaPredicted RBP11.23□□□□□ -0.61
GCA-210ENST00000487445 COMMD1Q8N668 190 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 ZNF491Q8N8L2 437 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 OR1B1Q8NGR6 318 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 Q8WTZ3 238 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 SLC25A22Q9H936 323 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 RNF114Q9Y508 228 aa11.23□□□□□ -0.61
GCA-210ENST00000487445 A0A1W2PPV4 95 aa11.22□□□□□ -0.61
GCA-210ENST00000487445 TEX46H3BTG2 121 aa11.22□□□□□ -0.61
GCA-210ENST00000487445 COX7A2P2O60397 106 aa11.22□□□□□ -0.61
GCA-210ENST00000487445 TOMM40O96008 361 aa11.22□□□□□ -0.61
GCA-210ENST00000487445 YPEL3P61236 119 aaPredicted RBP11.22□□□□□ -0.61
GCA-210ENST00000487445 CLLU1Q5K131 121 aa11.22□□□□□ -0.61
GCA-210ENST00000487445 ZNF343Q6P1L6 599 aa11.22□□□□□ -0.61
GCA-210ENST00000487445 OR51G1Q8NGK1 321 aa11.22□□□□□ -0.61
GCA-210ENST00000487445 HRH4Q9H3N8 390 aa11.22□□□□□ -0.61
GCA-210ENST00000487445 SEPSECSQ9HD40 501 aaKnown RBP11.22□□□□□ -0.61
GCA-210ENST00000487445 PUS1Q9Y606 427 aaKnown RBP eCLIP11.22□□□□□ -0.61
GCA-210ENST00000487445 IGHV3OR16-8A0A075B7F1 116 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.21□□□□□ -0.61
GCA-210ENST00000487445 IL4P05112 153 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 H2AFB1P0C5Y9 115 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 BLOC1S1P78537 153 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 TCTEX1D4Q5JR98 221 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 PXDC1Q5TGL8 231 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 FAM78BQ5VT40 261 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 LCN15Q6UWW0 184 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 SFT2D1Q8WV19 159 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 TMEM37Q8WXS4 190 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 SAT2Q96F10 170 aaPredicted RBP11.21□□□□□ -0.61
GCA-210ENST00000487445 RCC1LQ96I51 464 aaKnown RBP11.21□□□□□ -0.61
GCA-210ENST00000487445 ACTR3CQ9C0K3 210 aaPredicted RBP11.21□□□□□ -0.61
GCA-210ENST00000487445 DNAJC4Q9NNZ3 241 aa11.21□□□□□ -0.61
GCA-210ENST00000487445 CLPSL1A2RUU4 121 aa11.21□□□□□ -0.62
GCA-210ENST00000487445 CDC34P49427 236 aaPredicted RBP11.21□□□□□ -0.62
GCA-210ENST00000487445 ZNF726P1Q15940 193 aa11.21□□□□□ -0.62
GCA-210ENST00000487445 SPSB3Q6PJ21 355 aa11.21□□□□□ -0.62
GCA-210ENST00000487445 DPPA3Q6W0C5 159 aa11.21□□□□□ -0.62
GCA-210ENST00000487445 SSX7Q7RTT5 188 aa11.21□□□□□ -0.62
GCA-210ENST00000487445 RNF152Q8N8N0 203 aa11.21□□□□□ -0.62
GCA-210ENST00000487445 UBE2E2Q96LR5 201 aa11.21□□□□□ -0.62
GCA-210ENST00000487445 UHRF2Q96PU4 802 aa11.21□□□□□ -0.62
GCA-210ENST00000487445 PEF1Q9UBV8 284 aaKnown RBP11.21□□□□□ -0.62
GCA-210ENST00000487445 NF1P21359 2839 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 HYPMO75409 117 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 OR2C1O95371 312 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 C10orf113Q5VZT2 155 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 SPATA31B1PQ5VZV4 182 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 PATE2Q6UY27 113 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 ZNF600Q6ZNG1 722 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 OR1L4Q8NGR5 311 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 RAB24Q969Q5 203 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 RNF125Q96EQ8 232 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 ATP6V0BQ99437 205 aa11.2□□□□□ -0.62
GCA-210ENST00000487445 CD28P10747 220 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 FGF8P55075 233 aaPredicted RBP11.19□□□□□ -0.62
GCA-210ENST00000487445 RHOBP62745 196 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 RELQ04864 619 aaPredicted RBP11.19□□□□□ -0.62
GCA-210ENST00000487445 C18orf65Q6ZTR6 163 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 GATAD1Q8WUU5 269 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 PFDN5Q99471 154 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 TEP1Q99973 2627 aaKnown RBP11.19□□□□□ -0.62
GCA-210ENST00000487445 ELOA3CA0A087WX78 387 aaPredicted RBP11.19□□□□□ -0.62
GCA-210ENST00000487445 LGALS1P09382 135 aaKnown RBP11.19□□□□□ -0.62
GCA-210ENST00000487445 TOMM20LQ6UXN7 152 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 MIR17HGQ75NE6 70 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 LINC00305Q7Z4B0 112 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 IQCF2Q8IXL9 164 aa11.19□□□□□ -0.62
GCA-210ENST00000487445 CTXND1A0A1B0GTU2 59 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 A0A1W2PRX2 142 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 MAP1LC3B2A6NCE7 125 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 BMPR1BO00238 502 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 GGCTO75223 188 aaKnown RBP11.18□□□□□ -0.62
GCA-210ENST00000487445 PROK1P58294 105 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 USF2Q15853 346 aaPredicted RBP11.18□□□□□ -0.62
GCA-210ENST00000487445 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.18□□□□□ -0.62
GCA-210ENST00000487445 WIPF2Q8TF74 440 aaPredicted RBP11.18□□□□□ -0.62
GCA-210ENST00000487445 C20orf24Q9BUV8 137 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 C19orf24Q9BVV8 132 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 MAP1LC3BQ9GZQ8 125 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 FUT9Q9Y231 359 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 HIGD1AQ9Y241 93 aa11.18□□□□□ -0.62
GCA-210ENST00000487445 TRAV5A0A0B4J249 113 aa11.17□□□□□ -0.62
GCA-210ENST00000487445 ZNF320A2RRD8 509 aa11.17□□□□□ -0.62
GCA-210ENST00000487445 NUDT19A8MXV4 375 aa11.17□□□□□ -0.62
GCA-210ENST00000487445 SEC14L6B5MCN3 397 aa11.17□□□□□ -0.62
GCA-210ENST00000487445 CDX1P47902 265 aaPredicted RBP11.17□□□□□ -0.62
GCA-210ENST00000487445 PLP1P60201 277 aa11.17□□□□□ -0.62
GCA-210ENST00000487445 FAM209BQ5JX69 171 aa11.17□□□□□ -0.62
GCA-210ENST00000487445 MORN5Q5VZ52 161 aa11.17□□□□□ -0.62
GCA-210ENST00000487445 JMJD1CQ15652 2540 aa11.17□□□□□ -0.62
GCA-210ENST00000487445 DEFB136Q30KP8 78 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 169.4 ms