RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 CLEC5AQ9NY25 188 aa3.84□□□□□ -1.79
HDAC6-223ENST00000480525 MGAT4CQ9UBM8 478 aa3.84□□□□□ -1.79
HDAC6-223ENST00000480525 WDR83OSQ9Y284 106 aa3.84□□□□□ -1.79
HDAC6-223ENST00000480525 PUS1Q9Y606 427 aaKnown RBP eCLIP3.84□□□□□ -1.79
HDAC6-223ENST00000480525 KIR2DL5BA0A0G2JN68 375 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 KIR2DL5BA0A0G2JPC4 375 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 ZFP92A6NM28 416 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 SSNA1O43805 119 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 NXPH3O95157 252 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 HNRNPCP07910 306 aaKnown RBP eCLIP3.83□□□□□ -1.8
HDAC6-223ENST00000480525 PSG1P11464 419 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 RPL29P47914 159 aaKnown RBP3.83□□□□□ -1.8
HDAC6-223ENST00000480525 PAFAH1B2P68402 229 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 PRR20EP86478 221 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 PRR20CP86479 221 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 PRR20DP86480 221 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 PRR20BP86481 221 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 PRR20AP86496 221 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 RAB32Q13637 225 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 CD300EQ496F6 205 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-223ENST00000480525 SPANXN5Q5MJ07 72 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 SPATA31B1PQ5VZV4 182 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 LINC00322Q6ZN03 302 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-223ENST00000480525 GTSCR1Q86UQ5 136 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 TMEM61Q8N0U2 210 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 KIR2DL5AQ8N109 375 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 UXS1Q8NBZ7 420 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 KIR2DL5BQ8NHK3 375 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 DYNLRB2Q8TF09 96 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 GLMPQ8WWB7 406 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 NPIPB3Q92617 1050 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 AQP10Q96PS8 301 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 DUX3Q96PT4 197 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 PFDN5Q99471 154 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 NEURL2Q9BR09 285 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 TMEM147Q9BVK8 224 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 MED28Q9H204 178 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 UQCC1Q9NVA1 299 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 C19orf73Q9NVV2 129 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 AURKAIP1Q9NWT8 199 aaPredicted RBP3.83□□□□□ -1.8
HDAC6-223ENST00000480525 MRPL36Q9P0J6 103 aaKnown RBP3.83□□□□□ -1.8
HDAC6-223ENST00000480525 GSKIPQ9P0R6 139 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 MLXQ9UH92 298 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 ALG5Q9Y673 324 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 SMAD5-AS1Q9Y6J3 95 aa3.83□□□□□ -1.8
HDAC6-223ENST00000480525 A0A087X0K7 114 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 ZNF320A2RRD8 509 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 ZNF785A8K8V0 405 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 GOSR2O14653 212 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 ZNF253O75346 499 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 IL4P05112 153 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 IAPPP10997 89 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 SPNP16150 400 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 ATF4P18848 351 aaPredicted RBP3.82□□□□□ -1.8
HDAC6-223ENST00000480525 CAV2P51636 162 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 KRTAP10-11P60412 298 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 DEFA6Q01524 100 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 SLC38A11Q08AI6 406 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 ZNF266Q14584 549 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 ZNF345Q14585 488 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 USF2Q15853 346 aaPredicted RBP3.82□□□□□ -1.8
HDAC6-223ENST00000480525 SPINK9Q5DT21 86 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 C11orf87Q6NUJ2 197 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 RBPMS2Q6ZRY4 209 aaKnown RBP3.82□□□□□ -1.8
HDAC6-223ENST00000480525 Q8N1Y9 231 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 ARL6IP6Q8N6S5 226 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 OR1B1Q8NGR6 318 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 THAP6Q8TBB0 222 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 GATAD1Q8WUU5 269 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 RNF2Q99496 336 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 RNF126Q9BV68 326 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 RHPN1-AS1Q9BWJ2 59 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 MAGT1Q9H0U3 335 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 RABAC1Q9UI14 185 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 TIMM9Q9Y5J7 89 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 COL7A1Q02388 2944 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 TGP01266 2768 aa3.82□□□□□ -1.8
HDAC6-223ENST00000480525 HMSDA8MTL9 139 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 FAM25EA8MYX2 175 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 C17orf112F2Z3M2 114 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 H0YIZ8 118 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 K7EIL1 84 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 K7EQG2 157 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 UBE2CO00762 179 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 ISLRO14498 428 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 CCSO14618 274 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 TAAR5O14804 337 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 SCGB1D2O95969 90 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 IGHV3-23P01764 117 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 METTL15P1P0C7V9 234 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 RPL7P18124 248 aaKnown RBP3.81□□□□□ -1.8
HDAC6-223ENST00000480525 CXCL3P19876 107 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 BCAP31P51572 246 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 SERF2P84101 59 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 DEFA5Q01523 94 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 EWSR1Q01844 656 aaKnown RBP eCLIP3.81□□□□□ -1.8
HDAC6-223ENST00000480525 AKR1C1Q04828 323 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 PDE6HQ13956 83 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 OPCMLQ14982 345 aa3.81□□□□□ -1.8
HDAC6-223ENST00000480525 MLANAQ16655 118 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms