RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 OR2H2O95918 312 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 CCL3P10147 92 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 NFYBP25208 207 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 S100A4P26447 101 aaKnown RBP1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 FKBP2P26885 142 aaKnown RBP1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 PSMB8P28062 276 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 RBM11P57052 281 aaKnown RBP1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 YPEL3P61236 119 aaPredicted RBP1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 SELENOWP63302 87 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 HIST1H1AQ02539 215 aaPredicted RBP1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 AKR1C1Q04828 323 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 RPL18Q07020 188 aaKnown RBP1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 SPANXN3Q5MJ09 141 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 C1orf140Q5VVS0 124 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 HRCT1Q6UXD1 115 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 PACRGLQ8N7B6 248 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 BORCS8Q96FH0 119 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 TXNDC17Q9BRA2 123 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 GGACTQ9BVM4 153 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 CACYBPQ9HB71 228 aaKnown RBP1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 POLA1P09884 1462 aaPredicted RBP1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 ZNF518AQ6AHZ1 1483 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 ITGB4P16144 1822 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 LTBP2Q14767 1821 aa1.87□□□□□ -2.11
SMNDC1-205ENST00000477763 SLIT2O94813 1529 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 OVOS2A0A0J9YW53 1432 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 OVOS2Q6IE36 1432 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 SMG6Q86US8 1419 aaKnown RBP1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 MEIKINA0A087WXM9 373 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 A0A0D9SEW6 157 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 IRGMA1A4Y4 181 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 ZNF860A6NHJ4 632 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 PCNX2A6NKB5 2137 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 TMEM212A6NML5 194 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 FABP5P3A8MUU1 101 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 FAM25AB3EWG3 89 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 FAM25CB3EWG5 89 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 FAM25GB3EWG6 89 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 ATP6V1G2-DDX39BF2Z307 99 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 GABARAPH6UMI1 98 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 M0R2Z0 102 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 M0R378 163 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 DPM2O94777 84 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 NPYP01303 97 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 IFNGP01579 166 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 UCHL1P09936 223 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 CRHBPP24387 322 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 INSL3P51460 131 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 FXYD7P58549 80 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 TAS2R30P59541 319 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 RRAS2P62070 204 aaPredicted RBP1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 SLC38A11Q08AI6 406 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 BCL2L15Q5TBC7 163 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 TRAPPC6BQ86SZ2 158 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 RPP25LQ8N5L8 163 aaKnown RBP1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 SLC30A7Q8NEW0 376 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 OR52R1Q8NGF1 315 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 OR4C6Q8NH72 309 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 LXNQ9BS40 222 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 OR8D2Q9GZM6 311 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 CXCL16Q9H2A7 254 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 OTORQ9NRC9 128 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 SLC39A9Q9NUM3 307 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 ERG28Q9UKR5 140 aa1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 RBM7Q9Y580 266 aaKnown RBP1.86□□□□□ -2.11
SMNDC1-205ENST00000477763 ADAMTSL1Q8N6G6 1762 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 CACNA1GO43497 2377 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 PTPRGP23470 1445 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 TRBV7-6A0A0J9YX20 115 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 A0A1B0GW64 132 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 H3BPC8 53 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 J3QQQ9 107 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 K7ERU9 68 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 LEPROTO15243 131 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 IGHV1-69P01742 117 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 IGKV1-16P04430 117 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 EIF5AP63241 154 aaKnown RBP1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 DEFB103AP81534 67 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 EMX2Q04743 252 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 LINC01554Q52M75 96 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 HAGHLQ6PII5 290 aaPredicted RBP1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 CNEP1R1Q8N9A8 125 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 TSTD1Q8NFU3 115 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 CLDND2Q8NHS1 167 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 PPTC7Q8NI37 304 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 DCANP1Q8TF63 244 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 TMEM106AQ96A25 262 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 YPEL2Q96QA6 119 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 C12orf57Q99622 126 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 ZNF471Q9BX82 626 aaPredicted RBP1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 TTTY12Q9BZ98 90 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 SMIM3Q9BZL3 60 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 TCEAL2Q9H3H9 227 aaPredicted RBP1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 C16orf95Q9H693 158 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 NAT8BQ9UHF3 227 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 CAMSAP2Q08AD1 1489 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 SYNJ1O43426 1573 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 DIP2BQ9P265 1576 aa1.85□□□□□ -2.11
SMNDC1-205ENST00000477763 PPRC1Q5VV67 1664 aaKnown RBP1.84□□□□□ -2.11
SMNDC1-205ENST00000477763 A0A087X0T9 212 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms