RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 S100A11P31949 105 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 ID3Q02535 119 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 ANKRD39Q53RE8 183 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 PRSS54Q6PEW0 395 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 PHYHIPLQ96FC7 376 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 C20orf24Q9BUV8 137 aa7.32□□□□□ -1.24
HDAC3-208ENST00000476739 ZNF785A8K8V0 405 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 SNRPGP15A8MWD9 76 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 FAM90A26D6RGX4 464 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 NUPL2O15504 423 aaKnown RBP7.31□□□□□ -1.24
HDAC3-208ENST00000476739 SYNGR2O43760 224 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 SSNA1O43805 119 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 RLN2P04090 185 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 NPBWR1P48145 328 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 TIGITQ495A1 244 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 BTNL8Q6UX41 500 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 TOMM20LQ6UXN7 152 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 Q8N1Y9 231 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 OR11H7Q8NGC8 314 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 OR4X1Q8NH49 305 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 DYNLRB2Q8TF09 96 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 WDR89Q96FK6 387 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-208ENST00000476739 CACFD1Q9UGQ2 172 aa7.31□□□□□ -1.24
HDAC3-208ENST00000476739 IGHV3-49A0A0A0MS15 119 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 H3BP45 60 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 UBE2CO00762 179 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 YIF1AO95070 293 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 IFNA21P01568 189 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 IGKV1-17P01599 117 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 IL5P05113 134 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 RND2P52198 227 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 ELLP55199 621 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-208ENST00000476739 CD69Q07108 199 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 IAH1Q2TAA2 248 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-208ENST00000476739 TMEM61Q8N0U2 210 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 OR2T35Q8NGX2 323 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 RNASEH2CQ8TDP1 164 aaKnown RBP7.3□□□□□ -1.24
HDAC3-208ENST00000476739 ST8SIA2Q92186 375 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 NPIPB3Q92617 1050 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 TMPRSS5Q9H3S3 457 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 ZFAND3Q9H8U3 227 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 DAZ1Q9NQZ3 744 aaKnown RBP7.3□□□□□ -1.24
HDAC3-208ENST00000476739 GAR1Q9NY12 217 aaKnown RBP7.3□□□□□ -1.24
HDAC3-208ENST00000476739 MRPL27Q9P0M9 148 aaKnown RBP7.3□□□□□ -1.24
HDAC3-208ENST00000476739 UFC1Q9Y3C8 167 aa7.3□□□□□ -1.24
HDAC3-208ENST00000476739 PUS1Q9Y606 427 aaKnown RBP eCLIP7.3□□□□□ -1.24
HDAC3-208ENST00000476739 IGHV3OR16-13A0A075B7E8 117 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 IGHV3-74A0A0B4J1X5 117 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 A0A0D9SG52 128 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 TMEM218A2RU14 115 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 C1orf196B1AJZ1 125 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 PRSS46E5RG02 174 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 SMLR1H3BR10 107 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 SSSCA1O60232 199 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 MED6O75586 246 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 SCAF4O95104 1147 aaKnown RBP7.29□□□□□ -1.24
HDAC3-208ENST00000476739 SCGB1D2O95969 90 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 APOHP02749 345 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-208ENST00000476739 CD7P09564 240 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 IGLC1P0CG04 106 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 NKX2-1P43699 371 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-208ENST00000476739 PAX9P55771 341 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 SPANXN5Q5MJ07 72 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 LCN12Q6JVE5 192 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 GSG1LQ6UXU4 331 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 SLC16A13Q7RTY0 426 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 TMEM116Q8NCL8 245 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 OR11H4Q8NGC9 324 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 OR2K2Q8NGT1 345 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 NIT2Q9NQR4 276 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 TECRQ9NZ01 308 aaKnown RBP7.29□□□□□ -1.24
HDAC3-208ENST00000476739 GSKIPQ9P0R6 139 aa7.29□□□□□ -1.24
HDAC3-208ENST00000476739 RCL1Q9Y2P8 373 aaKnown RBP7.29□□□□□ -1.24
HDAC3-208ENST00000476739 IGKV1D-37A0A075B6S9 117 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 PMS2P5A8MQ11 134 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 K7EMT4 169 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 CHEK1O14757 476 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 EIF3GO75821 320 aaKnown RBP eCLIP7.28□□□□□ -1.24
HDAC3-208ENST00000476739 MBPP02686 304 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-208ENST00000476739 SLC25A4P12235 298 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 OR10J1P30954 320 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 RAB5CP51148 216 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 TAS2R60P59551 318 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 RAB2AP61019 212 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 GAMTQ14353 236 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 ETFRF1Q6IPR1 90 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 C15orf54Q8N8G6 183 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 ACY3Q96HD9 319 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 CIB3Q96Q77 187 aaPredicted RBP7.28□□□□□ -1.24
HDAC3-208ENST00000476739 RNF2Q99496 336 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 ASCL2Q99929 193 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 WFDC10AQ9H1F0 79 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 PSENENQ9NZ42 101 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 SMPXQ9UHP9 88 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 CARHSP1Q9Y2V2 147 aaKnown RBP7.28□□□□□ -1.24
HDAC3-208ENST00000476739 SMAD5-AS1Q9Y6J3 95 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 DNAH9Q9NYC9 4486 aa7.28□□□□□ -1.24
HDAC3-208ENST00000476739 TRAV30A0A087WSZ9 112 aa7.27□□□□□ -1.25
HDAC3-208ENST00000476739 TRAV14DV4A0A0A6YYC5 116 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms