RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	LCN9	Q8WX39	176 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	FRZB	Q92765	325 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	TBX5	Q99593	518 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	TMEM70	Q9BUB7	260 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	SH3BGRL3	Q9H299	93 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	KCNIP2	Q9NS61	270 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	C21orf62	Q9NYP8	219 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	SS18L2	Q9UHA2	77 aa		4.62	□□□□□ -1.67
LRCH3-215	ENST00000476664	MED12L	Q86YW9	2145 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	TRAPPC13	A5PLN9	417 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	HMGB3	O15347	200 aa	Known RBP	4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	GSTZ1	O43708	216 aa	Predicted RBP	4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	SRSF10	O75494	262 aa	Known RBP	4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	FSTL3	O95633	263 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	C1QB	P02746	253 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	OPN1SW	P03999	348 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	IL1RN	P18510	177 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	ERP29	P30040	261 aa	Known RBP	4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	CMC4	P56277	68 aa	Predicted RBP	4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	UBA52	P62987	128 aa	Known RBP	4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	HOXC5	Q00444	222 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	FLI1	Q01543	452 aa	Predicted RBP	4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	SYCN	Q0VAF6	134 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	BAP18	Q8IXM2	172 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	ROPN1L	Q96C74	230 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	RSPO3	Q9BXY4	272 aa	Predicted RBP	4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	TTTY12	Q9BZ98	90 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	PARVB	Q9HBI1	364 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	TMEM38B	Q9NVV0	291 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	RWDD2A	Q9UIY3	292 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	PRND	Q9UKY0	176 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	RFNG	Q9Y644	331 aa		4.61	□□□□□ -1.67
LRCH3-215	ENST00000476664	NIN	Q8N4C6	2090 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	IGKV3D-15	A0A087WSY6	115 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	TRGV5	A0A0B4J1U4	118 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664		A0A0G2JMM0	328 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664		A0A1W2PPB8	328 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664		A0A1W2PRS3	328 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	PRORSD1P	A6NEY8	169 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	KIR3DP1	A8MWS1	328 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	C1GALT1C1L	P0DN25	315 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	SPI1	P17947	270 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	SPINT3	P49223	89 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	CCR6	P51684	374 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	GNB2	P62879	340 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	C14orf177	Q52M58	125 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	TMEM78	Q5T7P6	136 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	TIFAB	Q6ZNK6	161 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	LINC01551	Q86U37	167 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	ZNF329	Q86UD4	541 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	KRTCAP2	Q8N6L1	136 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	FER1L6-AS1	Q8NA97	138 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	GRPEL2	Q8TAA5	225 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	C11orf40	Q8WZ69	217 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	C12orf43	Q96C57	262 aa	Known RBP	4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	GPR146	Q96CH1	333 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	CMBL	Q96DG6	245 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	RMI2	Q96E14	147 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	TSPAN32	Q96QS1	320 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	CCL13	Q99616	98 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	ALX4	Q9H161	411 aa	Predicted RBP	4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	AK3	Q9UIJ7	227 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	ZNF222	Q9UK12	451 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	SSR3	Q9UNL2	185 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	MUC4	Q99102	2169 aa		4.6	□□□□□ -1.67
LRCH3-215	ENST00000476664	IGHV3OR15-7	A0A075B7D8	119 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	IGHV1-3	A0A0C4DH29	117 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664		A0A0J9YY10	115 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	MAP1LC3B2	A6NCE7	125 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	C11orf94	C9JXX5	98 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664		M0QZK8	103 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	AIP	O00170	330 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	MFSD11	O43934	449 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	OR7C2	O60412	319 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	NDUFC2	O95298	119 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	HLA-DQB1	P01920	261 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	PPBP	P02775	128 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	C8G	P07360	202 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	ZNF678	Q5SXM1	525 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	IBA57	Q5T440	356 aa	Known RBP	4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	DCUN1D2	Q6PH85	259 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	TOMM20L	Q6UXN7	152 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	DHFR2	Q86XF0	187 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	KRTAP19-1	Q8IUB9	90 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664		Q8N7P7	452 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	PBDC1	Q9BVG4	233 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	MAP1LC3B	Q9GZQ8	125 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	CXorf21	Q9HAI6	301 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	GPR84	Q9NQS5	396 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	ACER3	Q9NUN7	267 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	TAAR3P	Q9P1P4	343 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	MDFIC	Q9P1T7	246 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	RPS6KB2	Q9UBS0	482 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	TMEM56-RWDD3	S4R434	201 aa		4.59	□□□□□ -1.67
LRCH3-215	ENST00000476664	STARD9	Q9P2P6	4700 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	UQCRHL	A0A096LP55	91 aa		4.58	□□□□□ -1.68

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