RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 CUBNO60494 3623 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 IGLV11-55A0A075B6I3 123 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 HLA-DRB1P01911 266 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 C8orf88P0DMB2 117 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 DSCR9P59020 149 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 Q6ZS46 218 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 FAM24BQ8N5W8 94 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 C5orf56Q8N8D9 126 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 Q96MF0 132 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 C1RLQ9NZP8 487 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 F8W735 103 aaPredicted RBP4.89□□□□□ -1.63
CLK1-210ENST00000473565 CORTO00230 105 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 UBE2L3P68036 154 aaKnown RBP4.89□□□□□ -1.63
CLK1-210ENST00000473565 PMS2P11Q13670 270 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 LINC01356Q8N9X3 169 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 TRGV9Q99603 122 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 SDF2L1Q9HCN8 221 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 SMCO4Q9NRQ5 59 aa4.89□□□□□ -1.63
CLK1-210ENST00000473565 TRBV20OR9-2A0A075B6H5 130 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 OR2T8A6NH00 312 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 COLCA2A8K830 154 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 NPIPB5A8MRT5 1133 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 GGTLC3B5MD39 225 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 CLN5O75503 358 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 BLCAPP62952 87 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 Q56UQ5 140 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 TTC9CQ8N5M4 171 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 BLNKQ8WV28 456 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 TMEM250H0YL14 139 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 HYPMO75409 117 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 OR2C1O95371 312 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 BPIFB3P59826 476 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 SELENOTP62341 195 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 RPL23P62829 140 aaKnown RBP4.88□□□□□ -1.63
CLK1-210ENST00000473565 RHEBQ15382 184 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 TMEM249Q2WGJ8 235 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 KRTAP1-3Q8IUG1 177 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 CIARTQ8N365 385 aaPredicted RBP4.88□□□□□ -1.63
CLK1-210ENST00000473565 NECAP1Q8NC96 275 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 NOL4LQ96MY1 436 aaPredicted RBP4.88□□□□□ -1.63
CLK1-210ENST00000473565 PSMG3-AS1Q96PY0 264 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 SRSF8Q9BRL6 282 aaKnown RBP4.88□□□□□ -1.63
CLK1-210ENST00000473565 FBXL7Q9UJT9 491 aa4.88□□□□□ -1.63
CLK1-210ENST00000473565 TRAV20A0A0B4J274 112 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 GNG7O60262 68 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 IGHV4-59P01825 116 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 RD3LP0DJH9 198 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 IGHV4-31P0DP07 118 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 CRYBB3P26998 211 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 SUMO1P63165 101 aaKnown RBP4.87□□□□□ -1.63
CLK1-210ENST00000473565 TMEM241Q24JQ0 296 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 DEFB112Q30KQ8 113 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 TMEM95Q3KNT9 176 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 RNF212Q495C1 297 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 LCNL1Q6ZST4 164 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 C16orf82Q7Z2V1 217 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 ZFP82Q8N141 532 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 WFDC11Q8NEX6 87 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 OR1L4Q8NGR5 311 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 SGMS2Q8NHU3 365 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 NANPQ8TBE9 248 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 HIST1H2BAQ96A08 127 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 PFDN5Q99471 154 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 CHRDL1Q9BU40 450 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 PAXXQ9BUH6 204 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 MOB4Q9Y3A3 225 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 SMAD7O15105 426 aaKnown RBP4.87□□□□□ -1.63
CLK1-210ENST00000473565 IL4P05112 153 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 CRYBA1P05813 215 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 TAS2R45P59539 299 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 RHOGP84095 191 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 C15orf32Q32M92 178 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 PQLC2Q6ZP29 291 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 IL17RELQ6ZVW7 336 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 FXYD5Q96DB9 178 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 SGK494Q96LW2 274 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 LINC00479Q96M42 142 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 MRPL32Q9BYC8 188 aaKnown RBP4.87□□□□□ -1.63
CLK1-210ENST00000473565 MEGF9Q9H1U4 602 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 C21orf62Q9NYP8 219 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 NAT8Q9UHE5 227 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 GPR183P32249 361 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 RANP62826 216 aaKnown RBP4.87□□□□□ -1.63
CLK1-210ENST00000473565 GNG5P63218 68 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 USF2Q15853 346 aaPredicted RBP4.87□□□□□ -1.63
CLK1-210ENST00000473565 ELOVL1Q9BW60 279 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 OR51M1Q9H341 326 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 TMEM167BQ9NRX6 74 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 RPH3ALQ9UNE2 315 aa4.87□□□□□ -1.63
CLK1-210ENST00000473565 TGIF2-C20orf24A0A0A6YYL0 155 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 PDE6DO43924 150 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 CXCL1P09341 107 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 ADMP35318 185 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 MFAP4P55083 255 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 LOXL1Q08397 574 aaPredicted RBP4.86□□□□□ -1.63
CLK1-210ENST00000473565 NHLRC2Q8NBF2 726 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 FAM110DQ8TAY7 271 aaPredicted RBP4.86□□□□□ -1.63
CLK1-210ENST00000473565 C2CD4CQ8TF44 421 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 DUX5Q96PT3 197 aa4.86□□□□□ -1.63
CLK1-210ENST00000473565 BEX4Q9NWD9 120 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms