RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 NDUFA4O00483 81 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 NHLRC4P0CG21 123 aaPredicted RBP6.91□□□□□ -1.3
SMC4-213ENST00000472282 GP9P14770 177 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 CXCL3P19876 107 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 OR10J1P30954 320 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 GPX4P36969 197 aaPredicted RBP6.91□□□□□ -1.3
SMC4-213ENST00000472282 BCAP31P51572 246 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 CAV2P51636 162 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 RELQ04864 619 aaPredicted RBP6.91□□□□□ -1.3
SMC4-213ENST00000472282 GAMTQ14353 236 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 TIGITQ495A1 244 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 ZNF600Q6ZNG1 722 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 ACOT7LQ6ZUV0 252 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 PPP1R1CQ8WVI7 109 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 CACNG8Q8WXS5 425 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 NPIPB3Q92617 1050 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 C20orf24Q9BUV8 137 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 SMAD5-AS1Q9Y6J3 95 aa6.91□□□□□ -1.3
SMC4-213ENST00000472282 TRAV30A0A087WSZ9 112 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 FAM24AA6NFZ4 105 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 C2orf70A6NJV1 201 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 ZNF207O43670 478 aaKnown RBP6.9□□□□□ -1.3
SMC4-213ENST00000472282 SCGB2A1O75556 95 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 DEDDO75618 318 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 IGKV1-17P01599 117 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 CSN3P07498 182 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 FRMD6-AS1P0C7T7 363 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 IGLC1P0CG04 106 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 RRAS2P62070 204 aaPredicted RBP6.9□□□□□ -1.3
SMC4-213ENST00000472282 AKR1C1Q04828 323 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 TM4SF20Q53R12 229 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 IL34Q6ZMJ4 242 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 OR1S2Q8NGQ3 325 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 LYRM2Q9NU23 88 aaPredicted RBP6.9□□□□□ -1.3
SMC4-213ENST00000472282 OR5AC2Q9NZP5 309 aa6.9□□□□□ -1.3
SMC4-213ENST00000472282 IGKV1D-37A0A075B6S9 117 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 IGSF23A1L1A6 192 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 SMCO3A2RU48 225 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 ZFP92A6NM28 416 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 H0YIZ8 118 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 YIF1AO95070 293 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 MPC2O95563 127 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 IGLV1-51P01701 117 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 RLN2P04090 185 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 FOLR2P14207 255 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 ELLP55199 621 aaPredicted RBP6.89□□□□□ -1.31
SMC4-213ENST00000472282 DLK1P80370 383 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 ARL16Q0P5N6 197 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 TOMM20LQ6UXN7 152 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 ADAMTSL5Q6ZMM2 481 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 Q8N1Y9 231 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 OR10P1Q8NGE3 313 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 DYNLRB2Q8TF09 96 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 DAZ1Q9NQZ3 744 aaKnown RBP6.89□□□□□ -1.31
SMC4-213ENST00000472282 UFC1Q9Y3C8 167 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 PUS1Q9Y606 427 aaKnown RBP eCLIP6.89□□□□□ -1.31
SMC4-213ENST00000472282 SELENOKQ9Y6D0 94 aa6.89□□□□□ -1.31
SMC4-213ENST00000472282 IGKV1OR2-108A0A075B7D4 117 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 E5RGE8 158 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 CST7O76096 145 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 TOMM40O96008 361 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 PET100P0DJ07 73 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 CBLN1P23435 193 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 YPEL3P61236 119 aaPredicted RBP6.88□□□□□ -1.31
SMC4-213ENST00000472282 SLC38A11Q08AI6 406 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 TMEM252Q8N6L7 170 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 TMEM217Q8N7C4 229 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 THAP8Q8NA92 274 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 RCHY1Q96PM5 261 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 GINS3Q9BRX5 216 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 SIGLEC8Q9NYZ4 499 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 MBD2Q9UBB5 411 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 MLXQ9UH92 298 aa6.88□□□□□ -1.31
SMC4-213ENST00000472282 IGHV3OR16-13A0A075B7E8 117 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 IGHV3-49A0A0A0MS15 119 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 IGHV3-74A0A0B4J1X5 117 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 IZUMO1RA6ND01 250 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 K7EMT4 169 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 SCAF4O95104 1147 aaKnown RBP6.87□□□□□ -1.31
SMC4-213ENST00000472282 IL4P05112 153 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 GIPP09681 153 aaPredicted RBP6.87□□□□□ -1.31
SMC4-213ENST00000472282 PSG1P11464 419 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 P2RY1P47900 373 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 SULT1A1P50225 295 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 EWSR1Q01844 656 aaKnown RBP eCLIP6.87□□□□□ -1.31
SMC4-213ENST00000472282 ZNF90Q03938 601 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 OR2F1Q13607 317 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 BTNL8Q6UX41 500 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 TMEM144Q7Z5S9 345 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 STX12Q86Y82 276 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 LILRB2Q8N423 598 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 Q8WTZ3 238 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 MARC2Q969Z3 335 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 TRGV9Q99603 122 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 RNF126Q9BV68 326 aa6.87□□□□□ -1.31
SMC4-213ENST00000472282 MRPL27Q9P0M9 148 aaKnown RBP6.87□□□□□ -1.31
SMC4-213ENST00000472282 TRAV14DV4A0A0A6YYC5 116 aa6.86□□□□□ -1.31
SMC4-213ENST00000472282 IGHV7-4-1A0A0J9YVY3 117 aa6.86□□□□□ -1.31
SMC4-213ENST00000472282 UBE2L5PA0A1B0GUS4 154 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms