RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ZNF418Q8TF45 676 aaPredicted RBP11.24□□□□□ -0.61
BRAT1-203ENST00000467558 NPFFO15130 113 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 RNASE2P10153 161 aaKnown RBP11.23□□□□□ -0.61
BRAT1-203ENST00000467558 ZFP30Q9Y2G7 519 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 BTF3P20290 206 aaKnown RBP11.23□□□□□ -0.61
BRAT1-203ENST00000467558 GNG5P63218 68 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 C17orf58Q2M2W7 97 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 PCNX3Q9H6A9 2034 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 C15orf65H3BRN8 121 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 LOXP28300 417 aaPredicted RBP11.23□□□□□ -0.61
BRAT1-203ENST00000467558 C15orf32Q32M92 178 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 TMEM190Q8WZ59 177 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 AGMATQ9BSE5 352 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 RNASE7Q9H1E1 156 aaKnown RBP11.23□□□□□ -0.61
BRAT1-203ENST00000467558 TMEM242Q9NWH2 141 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 TRAV5A0A0B4J249 113 aa11.23□□□□□ -0.61
BRAT1-203ENST00000467558 NCOA6Q14686 2063 aaPredicted RBP11.22□□□□□ -0.61
BRAT1-203ENST00000467558 FOXA3P55318 350 aaPredicted RBP11.22□□□□□ -0.61
BRAT1-203ENST00000467558 ADAMTS9Q9P2N4 1935 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 A0A1B0GW15 77 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 IFITM10A6NMD0 228 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 C10orf142B7Z368 130 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 NDUFS8O00217 210 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 GGCTO75223 188 aaKnown RBP11.22□□□□□ -0.61
BRAT1-203ENST00000467558 TMEM50AO95807 157 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 SCGB1D4Q6XE38 83 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 IZUMO1RA6ND01 250 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 HIGD1CA8MV81 97 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 IGKV3-20P01619 116 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 SPATA31B1PQ5VZV4 182 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 TEX38Q6PEX7 206 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 SRSF8Q9BRL6 282 aaKnown RBP11.22□□□□□ -0.61
BRAT1-203ENST00000467558 YAE1D1Q9NRH1 226 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 TMEM14BQ9NUH8 114 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 AP5S1Q9NUS5 200 aa11.22□□□□□ -0.61
BRAT1-203ENST00000467558 IGKV1-39P01597 117 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 IGKV1D-39P04432 117 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 PAX8Q06710 450 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 DUX4L9Q6RFH8 374 aaPredicted RBP11.21□□□□□ -0.61
BRAT1-203ENST00000467558 ZNF841Q6ZN19 808 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 TMEM219Q86XT9 240 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 ZNRD1Q9P1U0 126 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 FOLR2P14207 255 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 FAM53AQ6NSI3 398 aaPredicted RBP11.21□□□□□ -0.61
BRAT1-203ENST00000467558 TMEM136Q6ZRR5 245 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 OR5AN1Q8NGI8 311 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 LINC00527Q9UJ94 153 aa11.21□□□□□ -0.61
BRAT1-203ENST00000467558 TMEM131Q92545 1883 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 KLF17Q5JT82 389 aaPredicted RBP11.21□□□□□ -0.62
BRAT1-203ENST00000467558 LINC00518Q8N0U6 118 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 LINC00311Q8N616 119 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 SLC25A16P16260 332 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 Q1RN00 199 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 BRD3OSQ6XYD6 125 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 IMMP2LQ96T52 175 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 KAAG1Q9UBP8 84 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 PSG8Q9UQ74 426 aa11.21□□□□□ -0.62
BRAT1-203ENST00000467558 IGHV3OR16-12A0A075B7B8 117 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 A6NNC1 897 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 H3BUX3 64 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 PAX9P55771 341 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 C11orf53Q8IXP5 236 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 ASCL2Q99929 193 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 NOTCH2Q04721 2471 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 AREGP15514 252 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 SMAGPQ0VAQ4 97 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 SAA4P35542 130 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 VDAC2P45880 294 aaPredicted RBP11.2□□□□□ -0.62
BRAT1-203ENST00000467558 ZNF833PQ6ZTB9 187 aa11.2□□□□□ -0.62
BRAT1-203ENST00000467558 SLC25A39Q9BZJ4 359 aaPredicted RBP11.2□□□□□ -0.62
BRAT1-203ENST00000467558 TRBV20OR9-2A0A075B6H5 130 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 RRN3P1Q2M238 152 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 FGF23Q9GZV9 251 aaPredicted RBP11.19□□□□□ -0.62
BRAT1-203ENST00000467558 TRBV24-1A0A075B6N3 115 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 PMS2P5A8MQ11 134 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 ASIPP42127 132 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 NUTF2P61970 127 aaKnown RBP11.19□□□□□ -0.62
BRAT1-203ENST00000467558 SPSB3Q6PJ21 355 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 MUC22E2RYF6 1773 aaPredicted RBP11.19□□□□□ -0.62
BRAT1-203ENST00000467558 A0A1W2PPI3 338 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 PF4P02776 101 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 FER1L6-AS1Q8NA97 138 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 C9JCJ5 164 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 NUDT3O95989 172 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 UBE2E1P51965 193 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 ZNF562Q6V9R5 426 aa11.19□□□□□ -0.62
BRAT1-203ENST00000467558 LINC01551Q86U37 167 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 PEMTQ9UBM1 199 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 DENND4AQ7Z401 1863 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 PIEZO2Q9H5I5 2752 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 J3QR89 54 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 M0R381 172 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 HOXA5P20719 270 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 ZNF134P52741 427 aa11.18□□□□□ -0.62
BRAT1-203ENST00000467558 MLANAQ16655 118 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms