RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 FAM90A2PQ658T7 463 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 CTRB2Q6GPI1 263 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 STPG3Q8N7X2 389 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 OR4F5Q8NH21 305 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 SLC35E1Q96K37 410 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 WNT10AQ9GZT5 417 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 RPS10P5Q9NQ39 176 aa13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 FBN1P35555 2871 aaKnown RBP13.23□□□□□ -0.29
EXOSC3-203ENST00000465229 NPIPB5A8MRT5 1133 aa13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 CRYGCP07315 174 aa13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 STAG3L2P0CL84 134 aa13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 STAG3L3P0CL85 134 aa13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 CFHR3Q02985 330 aa13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 C19orf35Q6ZS72 473 aa13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 TVP23CQ96ET8 276 aa13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 C19orf24Q9BVV8 132 aa13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 PUS1Q9Y606 427 aaKnown RBP eCLIP13.22□□□□□ -0.29
EXOSC3-203ENST00000465229 A0A087WWC5 75 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 LINC00869P0C866 280 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 CD81P60033 236 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 RHOBP62745 196 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 PNRC1Q12796 327 aaPredicted RBP13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 GCSAMLQ5JQS6 135 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 SLC16A13Q7RTY0 426 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 ZNF329Q86UD4 541 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 C15orf54Q8N8G6 183 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 FAM110DQ8TAY7 271 aaPredicted RBP13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 TXNDC17Q9BRA2 123 aa13.21□□□□□ -0.29
EXOSC3-203ENST00000465229 B4DEV8 164 aa13.21□□□□□ -0.3
EXOSC3-203ENST00000465229 C10orf99Q6UWK7 81 aa13.21□□□□□ -0.3
EXOSC3-203ENST00000465229 TMPRSS5Q9H3S3 457 aa13.21□□□□□ -0.3
EXOSC3-203ENST00000465229 CLPSL1A2RUU4 121 aa13.2□□□□□ -0.3
EXOSC3-203ENST00000465229 HMGB3O15347 200 aaKnown RBP13.2□□□□□ -0.3
EXOSC3-203ENST00000465229 CXorf1O96002 111 aa13.2□□□□□ -0.3
EXOSC3-203ENST00000465229 KRTAP24-1Q3LI83 254 aa13.2□□□□□ -0.3
EXOSC3-203ENST00000465229 RNF114Q9Y508 228 aa13.2□□□□□ -0.3
EXOSC3-203ENST00000465229 DMRT1Q9Y5R6 373 aa13.2□□□□□ -0.3
EXOSC3-203ENST00000465229 COL6A5A8TX70 2615 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 IGKV1OR2-108A0A075B7D4 117 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 PSMB11A5LHX3 300 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 IGLV1-40P01703 118 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 IGHG4P01861 327 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 ATF4P18848 351 aaPredicted RBP13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 CEBPGP53567 150 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 MFAP2P55001 183 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 ETFRF1Q6IPR1 90 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 THAP8Q8NA92 274 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 OR1P1Q8NH06 330 aa13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 WIPF2Q8TF74 440 aaPredicted RBP13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 F11RQ9Y624 299 aaKnown RBP13.19□□□□□ -0.3
EXOSC3-203ENST00000465229 LOC105371267A0A1B0GV96 52 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 COLCA2A8K830 154 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 CORTO00230 105 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 EIF3GO75821 320 aaKnown RBP eCLIP13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 MT-CO2P00403 227 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 DEFA4P12838 97 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 PROK1P58294 105 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 SLC35B1P78383 322 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 FANCD2OSQ96PS1 177 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 C20orf24Q9BUV8 137 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 TENM1Q9UKZ4 2725 aa13.18□□□□□ -0.3
EXOSC3-203ENST00000465229 TMEM89A2RUT3 159 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 OR10J1P30954 320 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 KLHDC1Q8N7A1 406 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 MS4A10Q96PG2 267 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 KLK15Q9H2R5 256 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 ZNF355PQ9NSJ1 428 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 ARL2-SNX15V9GYD0 113 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 IGLV11-55A0A075B6I3 123 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 A0A1B0GUS0 222 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 HAX1O00165 279 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 PDE6DO43924 150 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 PAGE4O60829 102 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 BRI3O95415 125 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 ARL14EPLP0DKL9 152 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 PSMB8P28062 276 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 SELENOTP62341 195 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 FOXL1Q12952 345 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 KLK9Q2XQG4 91 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 TEX38Q6PEX7 206 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 OR5AU1Q8NGC0 362 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 RNF2Q99496 336 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 FNDC4Q9H6D8 234 aaPredicted RBP13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 SDF2L1Q9HCN8 221 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 KLK9Q9UKQ9 250 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 FUT9Q9Y231 359 aa13.17□□□□□ -0.3
EXOSC3-203ENST00000465229 TRBV9A0A0B4J1U6 114 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 CXorf65A6NEN9 183 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 MT-ND4LP03901 98 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 OR5G3P0C626 314 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 PF4V1P10720 104 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 FOLR2P14207 255 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 MLANAQ16655 118 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 LCNL1Q6ZST4 164 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 CYP2G1PQ6ZSU1 146 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 IQCF2Q8IXL9 164 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 OR1L6Q8NGR2 347 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 OR4F4Q96R69 305 aa13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 SEPSECSQ9HD40 501 aaKnown RBP13.16□□□□□ -0.3
EXOSC3-203ENST00000465229 ZNF727A8MUV8 499 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms