RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 STOML3Q8TAV4 291 aa6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 TRGV9Q99603 122 aa6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 GINS3Q9BRX5 216 aa6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 ZFAND3Q9H8U3 227 aa6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 NPVFQ9HCQ7 196 aa6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 PEF1Q9UBV8 284 aaKnown RBP6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 SLC45A2Q9UMX9 530 aa6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 TSSC4Q9Y5U2 329 aaPredicted RBP6.88□□□□□ -1.31
NUDCD3-204ENST00000464812 NOTCH3Q9UM47 2321 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 NUDT19A8MXV4 375 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 YIF1AO95070 293 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 OR2C1O95371 312 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 IFNA5P01569 189 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 LINC00869P0C866 280 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 PSG1P11464 419 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 CAMLGP49069 296 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 SLURP1P55000 103 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 FHL3Q13643 280 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 USF2Q15853 346 aaPredicted RBP6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 NSUN5P1Q3KNT7 163 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 LCE2CQ5TA81 110 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 UNQ9165/PRO28630Q6UXU0 137 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 STPG3Q8N7X2 389 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 C3orf56Q8N813 242 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 BPIFCQ8NFQ6 507 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 ST8SIA2Q92186 375 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 VSIRQ9H7M9 311 aa6.87□□□□□ -1.31
NUDCD3-204ENST00000464812 BORCS7-ASMTA0A0B4J1R7 106 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 NUPL2O15504 423 aaKnown RBP6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 WIPF1O43516 503 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 JTBO76095 146 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 TOMM40O96008 361 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 SPP1P10451 314 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 HOXD3P31249 432 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 ELLP55199 621 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 YPEL3P61236 119 aaPredicted RBP6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 SPSB3Q6PJ21 355 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 ZNF600Q6ZNG1 722 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 SLC51BQ86UW2 128 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 NDUFA11Q86Y39 141 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 OR11H1Q8NG94 326 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 TMEM190Q8WZ59 177 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 ATP6V0BQ99437 205 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 SLC25A32Q9H2D1 315 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 DOK5Q9P104 306 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 PUS1Q9Y606 427 aaKnown RBP eCLIP6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 PXMP4Q9Y6I8 212 aa6.86□□□□□ -1.31
NUDCD3-204ENST00000464812 TRAV30A0A087WSZ9 112 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 WI2-2373I1.2A0A1W2PRP0 233 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 LINC01619G3V211 115 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 ZNF207O43670 478 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 GGCTO75223 188 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 MPDU1O75352 247 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 EIF3GO75821 320 aaKnown RBP eCLIP6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 TSPAN15O95858 294 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 HSPB1P04792 205 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 RPL29P47914 159 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 RAB2AP61019 212 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 LYZP61626 148 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 B2MP61769 119 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 ZNF616Q08AN1 781 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 FAM209BQ5JX69 171 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 FAM74A1Q5RGS3 127 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 PRR31Q5SQ13 230 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 MORN5Q5VZ52 161 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 TOMM20LQ6UXN7 152 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 PATE2Q6UY27 113 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 BAP18Q8IXM2 172 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 OR51G1Q8NGK1 321 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 OR1N2Q8NGR9 330 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 OR2G3Q8NGZ4 309 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 SCGB1C1Q8TD33 95 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 TMED6Q8WW62 240 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 RNF125Q96EQ8 232 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 PSMG3Q9BT73 122 aaPredicted RBP6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 SLC39A9Q9NUM3 307 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 GAR1Q9NY12 217 aaKnown RBP6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 TIMM9Q9Y5J7 89 aa6.85□□□□□ -1.31
NUDCD3-204ENST00000464812 CCL24O00175 119 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 NDUFA4O00483 81 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 IL4P05112 153 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 RD3LP0DJH9 198 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 TPT1P13693 172 aaKnown RBP6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 SYNJ2BPP57105 145 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 IFITM2Q01629 132 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 RPEL1Q2QD12 228 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 FFAR4Q5NUL3 377 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 SPATA31B1PQ5VZV4 182 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 SHISA2Q6UWI4 295 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 ALKAL2Q6UX46 152 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 SSX7Q7RTT5 188 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 TMEM37Q8WXS4 190 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 UHRF2Q96PU4 802 aa6.84□□□□□ -1.31
NUDCD3-204ENST00000464812 IGHV3-49A0A0A0MS15 119 aa6.83□□□□□ -1.32
NUDCD3-204ENST00000464812 TMEM213A2RRL7 107 aa6.83□□□□□ -1.32
NUDCD3-204ENST00000464812 C17orf112F2Z3M2 114 aa6.83□□□□□ -1.32
NUDCD3-204ENST00000464812 APOHP02749 345 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms