RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ECSCRQ19T08 205 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 VMA21Q3ZAQ7 101 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 C14orf177Q52M58 125 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 LAMTOR1Q6IAA8 161 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 TCTEX1D1Q8N7M0 179 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 LFNGQ8NES3 379 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 OR2T35Q8NGX2 323 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 RNASE11Q8TAA1 199 aaKnown RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 CD300LFQ8TDQ1 290 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 ARPC1AQ92747 370 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 P2RX4Q99571 388 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 TSNAXQ99598 290 aaKnown RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 ASCL2Q99929 193 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 FNDC4Q9H6D8 234 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 STARD9Q9P2P6 4700 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 A0A1B0GU03 582 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 DUXBA0A1W2PPF3 345 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 RNF222A6NCQ9 220 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 MFSD2BA6NFX1 497 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 PRSS46E5RG02 174 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 DEDDO75618 318 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 B3GALNT1O75752 331 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 MPC2O95563 127 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 IGHV3-23P01764 117 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 IGHG2P01859 326 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 GIPP09681 153 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 TRAPPC2P0DI81 140 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 TRAPPC2BP0DI82 140 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 CXCL2P19875 107 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 NKX2-1P43699 371 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 HSPE1P61604 102 aaKnown RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 SRPXP78539 464 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 BSXQ3C1V8 233 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 ZNF562Q6V9R5 426 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 ZNF429Q86V71 674 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 SBSPONQ8IVN8 264 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 MMD2Q8IY49 270 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 OR5T1Q8NG75 326 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 OR4A16Q8NH70 328 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 DTD1Q8TEA8 209 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 RCHY1Q96PM5 261 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 RNF5Q99942 180 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 RASL11BQ9BPW5 248 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 ARPC5LQ9BPX5 153 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 PDCD10Q9BUL8 212 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 NMES1Q9C002 83 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 WFDC1Q9HC57 220 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 COA4Q9NYJ1 87 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 PLECQ15149 4684 aaKnown RBP2.73□□□□□ -1.97
SCFD1-204ENST00000463622 FXYD6-FXYD2A0A087WZ82 144 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 A0A1W2PN81 502 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 CEBPZOSA8MTT3 80 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 SYNGR2O43760 224 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 SNAPC5O75971 98 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 IFNA21P01568 189 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 IFNA17P01571 189 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 TRBV12-3P01733 135 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 METTL15P1P0C7V9 234 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 OR13C7P0DN81 318 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 SLC25A6P12236 298 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 CTRB1P17538 263 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 CHRNA7P36544 502 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 MYCNOSP40205 109 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 HOXA1P49639 335 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-204ENST00000463622 SPCS3P61009 180 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 KIAA0141Q14154 515 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-204ENST00000463622 PVRIGQ6DKI7 326 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 CTRB2Q6GPI1 263 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 THOC7Q6I9Y2 204 aaKnown RBP2.73□□□□□ -1.97
SCFD1-204ENST00000463622 UNQ5815/PRO19632Q6UWF5 114 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 ADAMTSL5Q6ZMM2 481 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 SLC35E3Q7Z769 313 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 CENPVQ7Z7K6 275 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-204ENST00000463622 AKAP14Q86UN6 197 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 TCTE3Q8IZS6 198 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 STPG2Q8N412 459 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 SLC24A4Q8NFF2 622 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 OR8H1Q8NGG4 311 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 OR4A5Q8NH83 315 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 MS4A10Q96PG2 267 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 COMMD5Q9GZQ3 224 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 EDA2RQ9HAV5 297 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.73□□□□□ -1.97
SCFD1-204ENST00000463622 PRNDQ9UKY0 176 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 KIAA1109Q2LD37 5005 aa2.73□□□□□ -1.97
SCFD1-204ENST00000463622 IGLV11-55A0A075B6I3 123 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 IGKV1OR2-108A0A075B7D4 117 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 TRAV41A0A0B4J266 112 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 K7EIM0 57 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 EIF3GO75821 320 aaKnown RBP eCLIP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 OR2J3O76001 311 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 CST7O76096 145 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 CNIH1O95406 144 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 IGHV3-11P01762 117 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 IGF1P05019 195 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 CRYGCP07315 174 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 PSMB6P28072 239 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 EIF2B2P49770 351 aaKnown RBP2.72□□□□□ -1.97
SCFD1-204ENST00000463622 ARHGDIBP52566 201 aa2.72□□□□□ -1.97
SCFD1-204ENST00000463622 EWSR1Q01844 656 aaKnown RBP eCLIP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms