RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 LINC00869P0C866 280 aa11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 ZNF90Q03938 601 aa11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 FOXE3Q13461 319 aa11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 TIGITQ495A1 244 aa11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 ACTR3CQ9C0K3 210 aaPredicted RBP11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 RPRMQ9NS64 109 aa11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 SERTAD4Q9NUC0 356 aa11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 MGAM2Q2M2H8 2515 aa11.79□□□□□ -0.52
TMEM39A-203ENST00000461654 OR2T8A6NH00 312 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 H2AFB1P0C5Y9 115 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 RD3LP0DJH9 198 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 YPEL3P61236 119 aaPredicted RBP11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 NDUFA5Q16718 116 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 PXDC1Q5TGL8 231 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 OR1L4Q8NGR5 311 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 Q8WTZ3 238 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 PFDN5Q99471 154 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 PLA2G2EQ9NZK7 142 aa11.78□□□□□ -0.52
TMEM39A-203ENST00000461654 COX7A2P2O60397 106 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 TOMM40O96008 361 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 CLEC3BP05452 202 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 GATA2P23769 480 aaPredicted RBP11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 PSMB8P28062 276 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 GPR183P32249 361 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 RHOBP62745 196 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 FAM122CQ6P4D5 195 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 SPSB3Q6PJ21 355 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 CLEC19AQ6UXS0 136 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 S100A7AQ86SG5 101 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 OR4X2Q8NGF9 303 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 OR51G1Q8NGK1 321 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 RNF2Q99496 336 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 KLK15Q9H2R5 256 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 GNB4Q9HAV0 340 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 PFDN2Q9UHV9 154 aa11.77□□□□□ -0.53
TMEM39A-203ENST00000461654 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 YIF1AO95070 293 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 HBE1P02100 147 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 OR5G3P0C626 314 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 PSG1P11464 419 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 CDC34P49427 236 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 FHITP49789 147 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 RELQ04864 619 aaPredicted RBP11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 KLHDC1Q8N7A1 406 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 GATAD1Q8WUU5 269 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 SFT2D1Q8WV19 159 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 VSIRQ9H7M9 311 aa11.76□□□□□ -0.53
TMEM39A-203ENST00000461654 CTXND1A0A1B0GTU2 59 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 F8W735 103 aaPredicted RBP11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 TGOLN2O43493 480 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 HYPMO75409 117 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 IGHV3-11P01762 117 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 CTSGP08311 255 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 ORM2P19652 201 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 S100A7P31151 101 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 ARL3P36405 182 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 C10orf113Q5VZT2 155 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 ZNF600Q6ZNG1 722 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 RPP25LQ8N5L8 163 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 OR5AU1Q8NGC0 362 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 OR1B1Q8NGR6 318 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 RCC1LQ96I51 464 aaKnown RBP11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 CCDC140Q96MF4 163 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 HRH4Q9H3N8 390 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
TMEM39A-203ENST00000461654 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 SEC14L6B5MCN3 397 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 WIPF1O43516 503 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 LYZP61626 148 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 GCSAMLQ5JQS6 135 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 FAM78BQ5VT40 261 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 ZNF343Q6P1L6 599 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 LCNL1Q6ZST4 164 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 RAB24Q969Q5 203 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 PBDC1Q9BVG4 233 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 MRPL32Q9BYC8 188 aaKnown RBP11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 SLC25A22Q9H936 323 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 DOK5Q9P104 306 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 PKD1L1Q8TDX9 2849 aa11.74□□□□□ -0.53
TMEM39A-203ENST00000461654 NUDT19A8MXV4 375 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 IL4P05112 153 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 RPLP1P05386 114 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 TAS2R45P59539 299 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 PLP1P60201 277 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 C10orf99Q6UWK7 81 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 LCN15Q6UWW0 184 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 RNF152Q8N8N0 203 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 MBD3L1Q8WWY6 194 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 UBE2E2Q96LR5 201 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 CHRDL1Q9BU40 450 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 PEF1Q9UBV8 284 aaKnown RBP11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 FUT9Q9Y231 359 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 HIGD1AQ9Y241 93 aa11.73□□□□□ -0.53
TMEM39A-203ENST00000461654 TRRAPQ9Y4A5 3859 aa11.72□□□□□ -0.53
TMEM39A-203ENST00000461654 TRAV1-1A0A0B4J248 108 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms