RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 RTBDNQ9BSG5 229 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 TMEM222Q9H0R3 208 aa3.54□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 NAA60Q9H7X0 242 aa3.54□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 ZNF355PQ9NSJ1 428 aa3.54□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 NUDT15Q9NV35 164 aa3.54□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 COA4Q9NYJ1 87 aa3.54□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 CACFD1Q9UGQ2 172 aa3.54□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 TMEM56-RWDD3S4R434 201 aa3.54□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 VWFP04275 2813 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 NOTCH1P46531 2555 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 IGLV5-45A0A087WSX0 123 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 TRBV7-1A0A0A6YYK4 115 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 TEX50A0A1B0GTY4 177 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 NAP1L6A6NFF2 107 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 SEC14L6B5MCN3 397 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 OVOL1O14753 267 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 IGKV1-5P01602 117 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 IGHV3-11P01762 117 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 OR5AC1P0C628 307 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 FRMD6-AS1P0C7T7 363 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 APELAP0DMC3 54 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 RPL13AP40429 203 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 HOXA1P49639 335 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 AKR1C2P52895 323 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 ELLP55199 621 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 UBE2MP61081 183 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 HSPE1P61604 102 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 SRPXP78539 464 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 PRCDQ00LT1 54 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 ATP5G2Q06055 141 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 WT1-ASQ06250 92 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 RBMS2Q15434 407 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 USF2Q15853 346 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 C15orf32Q32M92 178 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 CNPY1Q3B7I2 92 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 TMEM128Q5BJH2 165 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 PVRIGQ6DKI7 326 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 SGPP2Q8IWX5 399 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 LINC00469Q8N7U9 141 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 OR52E5Q8NH55 327 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 PRSS3P2Q8NHM4 247 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 VN1R17PQ8TDU5 208 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 SCARB1Q8WTV0 552 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 CASTOR1Q8WTX7 329 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 DCUN1D4Q92564 292 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 LSM10Q969L4 123 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 TMEM230Q96A57 120 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 FAM210AQ96ND0 272 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 DUX3Q96PT4 197 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 OR5B12Q96R08 314 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 SDHCQ99643 169 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 NIPSNAP3BQ9BS92 247 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 CSTL1Q9H114 145 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 ALX4Q9H161 411 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 NRN1Q9NPD7 142 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 MCUBQ9NWR8 336 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 SIGLEC8Q9NYZ4 499 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 THYN1Q9P016 225 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 KCNIP3Q9Y2W7 256 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 OR51B2Q9Y5P1 312 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 DMRT1Q9Y5R6 373 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 F11RQ9Y624 299 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 SELENOKQ9Y6D0 94 aa3.53□□□□□ -1.84
RNU6ATAC28P-201ENST00000459249 PKD1L1Q8TDX9 2849 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 A0A0B4J2A0 478 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 DUXBA0A1W2PPF3 345 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 DBX1A6NMT0 343 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 LGALS9O00182 355 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 BMPR1BO00238 502 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 GGCTO75223 188 aaKnown RBP3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 OR2J3O76001 311 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 TRBV12-3P01733 135 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 MBP02144 154 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 PRH1P02810 166 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 S100A6P06703 90 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 OR13C7P0DN81 318 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 DEFA4P12838 97 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 RAB25P57735 213 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 SPCS3P61009 180 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 SUPT4H1P63272 117 aaKnown RBP3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 TMEM187Q14656 261 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 TRIM16LQ309B1 348 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 BSXQ3C1V8 233 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 SP6Q3SY56 376 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 TRIQKQ629K1 86 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 ZNF57Q68EA5 555 aaPredicted RBP3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 SELENOHQ8IZQ5 122 aaKnown RBP3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 LGI3Q8N145 548 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 C15orf54Q8N8G6 183 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 OR10W1Q8NGF6 305 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 OR1P1Q8NH06 330 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 LHFPL5Q8TAF8 219 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 ZNF502Q8TBZ5 544 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 S100ZQ8WXG8 99 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 EEF1AKMT3Q96AZ1 226 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 CCDC32Q9BV29 185 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 BATF3Q9NR55 127 aa3.52□□□□□ -1.85
RNU6ATAC28P-201ENST00000459249 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms