RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 PVRIGQ6DKI7 326 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF600Q6ZNG1 722 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF767PQ75MW2 155 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 LHFPL1Q86WI0 220 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 STHQ8IWL8 128 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 SELENOHQ8IZQ5 122 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 OR13C8Q8NGS7 320 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 TERB2Q8NHR7 220 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 RNASE11Q8TAA1 199 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 LHFPL5Q8TAF8 219 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 GLYATL2Q8WU03 294 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 GATAD1Q8WUU5 269 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 GPR146Q96CH1 333 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 GINS3Q9BRX5 216 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 RTBDNQ9BSG5 229 aaPredicted RBP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 PDCD10Q9BUL8 212 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 SCRT1Q9BWW7 348 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 VCX3AQ9NNX9 186 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 ENY2Q9NPA8 101 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 COPZ2Q9P299 210 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 MTFP1Q9UDX5 166 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 APLNQ9ULZ1 77 aa3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 PLECQ15149 4684 aaKnown RBP3.4□□□□□ -1.87
GTF3C3-208ENST00000455546 IGHV4-28A0A0C4DH34 117 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 TEX13DA0A0J9YY54 714 aaPredicted RBP3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 A0A1W2PS18 150 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 INS-IGF2F8WCM5 200 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 K7EQG2 157 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 CDS2O95674 445 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 RAB3DO95716 219 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 CD74P04233 296 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF182P17025 639 aaPredicted RBP3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 C4BPBP20851 252 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 UCP1P25874 307 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 CRYBB3P26998 211 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 HLA-DMBP28068 263 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 P2RY1P47900 373 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 RND2P52198 227 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 FXYD7P58549 80 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 DEFB1P60022 68 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 DHODHQ02127 395 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 DHRS2Q13268 280 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 LCE1DQ5T752 114 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 TMEM268Q5VZI3 342 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 STEAP1BQ6NZ63 245 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 PRSS54Q6PEW0 395 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 TRPT1Q86TN4 253 aaKnown RBP3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 Q8NAQ8 132 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 TMEM229BQ8NBD8 167 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 OR4X1Q8NH49 305 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 ZFAND1Q8TCF1 268 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 DCANP1Q8TF63 244 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 TMEM170AQ8WVE7 144 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 RRNAD1Q96FB5 475 aaKnown RBP3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 METTL26Q96S19 204 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 RAB40CQ96S21 281 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 MIXL1Q9H2W2 232 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 HSPB7Q9UBY9 170 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 ALMS1Q8TCU4 4167 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 FRAS1Q86XX4 4008 aa3.39□□□□□ -1.87
GTF3C3-208ENST00000455546 TRAV30A0A087WSZ9 112 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 PGPEP1LA6NFU8 196 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 CEBPZOSA8MTT3 80 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 RGS5O15539 181 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 IGKV3-20P01619 116 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 CD5P06127 495 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 IGLC1P0CG04 106 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 SMIM18P0DKX4 95 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 OR10J1P30954 320 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 RPL5P46777 297 aaKnown RBP3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 TAS2R19P59542 299 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 SPCS3P61009 180 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 SPCS2Q15005 226 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 USF2Q15853 346 aaPredicted RBP3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 BSXQ3C1V8 233 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 PSMG4Q5JS54 123 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 C16orf54Q6UWD8 224 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 Q6ZTC4 211 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 ARRDC1Q8N5I2 433 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 CCDC71LQ8N9Z2 235 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 CSNK1G2-AS1Q8NCQ2 148 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 Q8WTZ3 238 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF486Q96H40 463 aaPredicted RBP3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 ACY3Q96HD9 319 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 MFFQ9GZY8 342 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 TMEM222Q9H0R3 208 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 C11orf68Q9H3H3 251 aaKnown RBP3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 TMEM231Q9H6L2 316 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 CACNG5Q9UF02 275 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 CELA1Q9UNI1 258 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 GPR132Q9UNW8 380 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 C14orf166Q9Y224 244 aaKnown RBP3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 NACAE9PAV3 2078 aa3.38□□□□□ -1.87
GTF3C3-208ENST00000455546 IGHV4-4A0A075B6R2 117 aa3.37□□□□□ -1.87
GTF3C3-208ENST00000455546 TRAV2A0A0B4J234 112 aa3.37□□□□□ -1.87
GTF3C3-208ENST00000455546 HELTA6NFD8 242 aa3.37□□□□□ -1.87
GTF3C3-208ENST00000455546 GAGE10A6NGK3 116 aa3.37□□□□□ -1.87
GTF3C3-208ENST00000455546 ZNF705EA8MWA4 302 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms