RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PSMG4Q5JS54 123 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 ST6GALNAC6Q969X2 333 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 PEF1Q9UBV8 284 aaKnown RBP13.57□□□□□ -0.24
TCOF1-206ENST00000445265 SRSF9Q13242 221 aaKnown RBP eCLIP13.57□□□□□ -0.24
TCOF1-206ENST00000445265 C3orf36Q3SXR2 165 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 ZNF841Q6ZN19 808 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 ST6GALNAC3Q8NDV1 305 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 AKAP6Q13023 2319 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 TCRAP04437 139 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 MLANAQ16655 118 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 FREM1Q5H8C1 2179 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 A1L4Q6 167 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 ATP5G2Q06055 141 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 RNF5Q99942 180 aa13.57□□□□□ -0.24
TCOF1-206ENST00000445265 ZNF124Q15973 351 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 C21orf62-AS1Q17RA5 79 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 VWC2Q2TAL6 325 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 FER1L6-AS1Q8NA97 138 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 NUP35Q8NFH5 326 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 PCNX1Q96RV3 2341 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 NBASA2RRP1 2371 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 PSG1P11464 419 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 TIMM23O14925 209 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 CD33P20138 364 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 GCSHP23434 173 aa13.56□□□□□ -0.24
TCOF1-206ENST00000445265 TRBV20OR9-2A0A075B6H5 130 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 C3orf79P0CE67 100 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 C17orf58Q2M2W7 97 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 OR5AN1Q8NGI8 311 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 KLRB1Q12918 225 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 ADIPOQQ15848 244 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 C11orf52Q96A22 123 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 VKORC1Q9BQB6 163 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 PCNX2A6NKB5 2137 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 PRB3Q04118 309 aaPredicted RBP13.55□□□□□ -0.24
TCOF1-206ENST00000445265 PYGO2Q9BRQ0 406 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 ST20Q9HBF5 79 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 PF4V1P10720 104 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 Q8TCH9 128 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 C11orf1Q9H5F2 150 aa13.55□□□□□ -0.24
TCOF1-206ENST00000445265 IGHV1-3A0A0C4DH29 117 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 FAM181BA6NEQ2 426 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 IGHV3-23P01764 117 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 SLC25A39Q9BZJ4 359 aaPredicted RBP13.54□□□□□ -0.24
TCOF1-206ENST00000445265 PHLDA3Q9Y5J5 127 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 A0A1B0GWJ7 208 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 LYNX1G3V0Z9 82 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 LYNX1P0DP58 116 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 CRIP3Q6Q6R5 217 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 F11RQ9Y624 299 aaKnown RBP13.54□□□□□ -0.24
TCOF1-206ENST00000445265 ABCA1O95477 2261 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 USF3Q68DE3 2245 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 YLPM1P49750 1951 aaKnown RBP13.54□□□□□ -0.24
TCOF1-206ENST00000445265 C11orf53Q8IXP5 236 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 ZNF114Q8NC26 417 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 C20orf144Q9BQM9 153 aa13.54□□□□□ -0.24
TCOF1-206ENST00000445265 INTS1Q8N201 2190 aaKnown RBP13.54□□□□□ -0.24
TCOF1-206ENST00000445265 GPR183P32249 361 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 ZNF134P52741 427 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 ZNF329Q86UD4 541 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 SMIM12Q96EX1 92 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 NDUFA4L2Q9NRX3 87 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 POLR3KQ9Y2Y1 108 aaPredicted RBP13.53□□□□□ -0.24
TCOF1-206ENST00000445265 TM4SF20Q53R12 229 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 POU2AF1Q16633 256 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 COA6Q5JTJ3 125 aaKnown RBP13.53□□□□□ -0.24
TCOF1-206ENST00000445265 RAB37Q96AX2 223 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 SIGLEC9Q9Y336 463 aa13.53□□□□□ -0.24
TCOF1-206ENST00000445265 LOC102724200A0A096LPH7 203 aaPredicted RBP13.52□□□□□ -0.24
TCOF1-206ENST00000445265 A0A1B0GUS0 222 aa13.52□□□□□ -0.24
TCOF1-206ENST00000445265 FABP5P3A8MUU1 101 aa13.52□□□□□ -0.24
TCOF1-206ENST00000445265 PLA2G2CQ5R387 149 aa13.52□□□□□ -0.24
TCOF1-206ENST00000445265 SCRT1Q9BWW7 348 aa13.52□□□□□ -0.24
TCOF1-206ENST00000445265 A0A0G2JNJ9 132 aa13.52□□□□□ -0.24
TCOF1-206ENST00000445265 C7orf71A4D174 169 aa13.52□□□□□ -0.24
TCOF1-206ENST00000445265 Q9UFV3 132 aa13.52□□□□□ -0.24
TCOF1-206ENST00000445265 C10orf142B7Z368 130 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 CLEC2AQ6UVW9 174 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 IGHV3OR16-13A0A075B7E8 117 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 IGHV3-74A0A0B4J1X5 117 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 MUC21A0A0G2JKD1 596 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 MUC21A0A140T8X8 626 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 GTF3C1Q12789 2109 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 MUC21Q5SSG8 566 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 WFDC3Q8IUB2 231 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 LINC00479Q96M42 142 aa13.52□□□□□ -0.25
TCOF1-206ENST00000445265 IGLV3-9A0A075B6K5 115 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 TMEM238LA0A1B0GVL6 79 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 A6NJY4 79 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 PMS2P5A8MQ11 134 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 C18orf15Q96N68 181 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 ZNF207O43670 478 aaKnown RBP13.51□□□□□ -0.25
TCOF1-206ENST00000445265 ATP5LO75964 103 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 TOMM40O96008 361 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 TFPI2P48307 235 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 DLEU1O43261 78 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 EXOC3-AS1Q8N2X6 119 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 V9GYV3 84 aa13.51□□□□□ -0.25
TCOF1-206ENST00000445265 ZNF833PQ6ZTB9 187 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms