RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 GSX1Q9H4S2 264 aaPredicted RBP13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 PKDREJQ9NTG1 2253 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 KLK10O43240 276 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 MOSP00540 346 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 THBDP07204 575 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 LOXP28300 417 aaPredicted RBP13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 MYCNOSP40205 109 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 FAM19A2Q8N3H0 131 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 C18orf32Q8TCD1 76 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 BORCS7Q96B45 105 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 RITA1Q96K30 269 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 EPDR1Q9UM22 224 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 ZGRF1Q86YA3 2104 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 BSNQ9UPA5 3926 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 ADGRG4Q8IZF6 3080 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 SLC25A5P05141 298 aaKnown RBP13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 NTF3P20783 257 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 GNG5P63218 68 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 HCP5Q6MZN7 132 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 C19orf35Q6ZS72 473 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 STPG4Q8N801 248 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 BLNKQ8WV28 456 aa13.26□□□□□ -0.29
SEMA3B-207ENST00000441915 HIGD1CA8MV81 97 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 IGHV1-8P0DP01 117 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 PRRX1P54821 245 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 TMEM155Q4W5P6 130 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 NIT1Q86X76 327 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 SPACA3Q8IXA5 215 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 PCNX1Q96RV3 2341 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 IGHV3-72A0A0B4J1Y9 119 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 PGPA6NDG6 321 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 C22orf46C9J442 243 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 C3orf79P0CE67 100 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 DLX6P56179 175 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 RNASE6Q93091 150 aaKnown RBP13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 SMIM12Q96EX1 92 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 KAAG1Q9UBP8 84 aa13.25□□□□□ -0.29
SEMA3B-207ENST00000441915 IGLC7A0M8Q6 106 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 CRYGCP07315 174 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 SPATA45Q537H7 98 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 SSX8Q7RTT4 187 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 DYNLRB1Q9NP97 96 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 SH3BGRL2Q9UJC5 107 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 NBEAP1P0C6P0 100 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 UBE2V1Q13404 147 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 MRGPRG-AS1Q2M3A8 158 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 TEX45Q8NA69 505 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 TRGV9Q99603 122 aa13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 ALKBH7Q9BT30 221 aaPredicted RBP13.24□□□□□ -0.29
SEMA3B-207ENST00000441915 HSBP1O75506 76 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 CTRLP40313 264 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 TNXAQ16473 311 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 SGK494Q96LW2 274 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 GPR82Q96P67 336 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 C7orf69Q9H7B7 122 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 RPL27AP46776 148 aaKnown RBP13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 CAMPP49913 170 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 RUSC1-AS1Q66K80 236 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 ATP5L2Q7Z4Y8 100 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 TMEM116Q8NCL8 245 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 TMEM133Q9H2Q1 129 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 RPH3ALQ9UNE2 315 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 KLF12Q9Y4X4 402 aa13.23□□□□□ -0.29
SEMA3B-207ENST00000441915 HYPMO75409 117 aa13.22□□□□□ -0.29
SEMA3B-207ENST00000441915 CA7P43166 264 aa13.22□□□□□ -0.29
SEMA3B-207ENST00000441915 RNF151Q2KHN1 245 aa13.22□□□□□ -0.29
SEMA3B-207ENST00000441915 GDF5OSQ5U4N7 250 aa13.22□□□□□ -0.29
SEMA3B-207ENST00000441915 ZNF841Q6ZN19 808 aa13.22□□□□□ -0.29
SEMA3B-207ENST00000441915 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
SEMA3B-207ENST00000441915 DCHS1Q96JQ0 3298 aa13.22□□□□□ -0.29
SEMA3B-207ENST00000441915 CORTO00230 105 aa13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 APELAP0DMC3 54 aa13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 SSBP4Q9BWG4 385 aaPredicted RBP13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 OR2J3O76001 311 aa13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 TOMM40O96008 361 aa13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 KLF5Q13887 457 aaPredicted RBP13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 LHFPL4Q7Z7J7 247 aa13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 WNT10AQ9GZT5 417 aa13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 JKAMPQ9P055 326 aa13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 UQCR10Q9UDW1 63 aa13.21□□□□□ -0.29
SEMA3B-207ENST00000441915 ATMQ13315 3056 aa13.21□□□□□ -0.3
SEMA3B-207ENST00000441915 LOC105371242A0A075B767 164 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 C5orf17Q8NAS9 161 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 TNFRSF14Q92956 283 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 MLST8Q9BVC4 326 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 LAMTOR2Q9Y2Q5 125 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 DMXL2Q8TDJ6 3036 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 IGHV3-21A0A0B4J1V1 117 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 GPR6P46095 362 aaPredicted RBP13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 GFRALQ6UXV0 394 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 C8orf46Q8TAG6 207 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 FMC1Q96HJ9 113 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 NGBQ9NPG2 151 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 ACACAQ13085 2346 aa13.2□□□□□ -0.3
SEMA3B-207ENST00000441915 PPBPP02775 128 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 KLHDC1Q8N7A1 406 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 OR2D3Q8NGH3 330 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 ABHD17AQ96GS6 310 aa13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 RPP21Q9H633 154 aaKnown RBP13.19□□□□□ -0.3
SEMA3B-207ENST00000441915 SIGLEC9Q9Y336 463 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms