RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 RHOBP62745 196 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 OR4F5Q8NH21 305 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 FRZBQ92765 325 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 OR4F4Q96R69 305 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 PARLQ9H300 379 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 CREBBPQ92793 2442 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 GATA3P23771 443 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 Q96MF0 132 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 MEGF9Q9H1U4 602 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 TNFRSF19Q9NS68 423 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 S4R3C0 116 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 TEX15Q9BXT5 2789 aa16.65■□□□□ 0.26
PTPRF-207ENST00000436724 LINC01548A6NM66 108 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 K7EIM0 57 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 NDUFS6O75380 124 aaKnown RBP16.64■□□□□ 0.25
PTPRF-207ENST00000436724 FABP1P07148 127 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 PFN1P07737 140 aaKnown RBP16.64■□□□□ 0.25
PTPRF-207ENST00000436724 TRGC1P0CF51 173 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 C16orf82Q7Z2V1 217 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 KRTAP1-3Q8IUG1 177 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 OR5T1Q8NG75 326 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 UBE2G2P60604 165 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 FANCD2OSQ96PS1 177 aa16.64■□□□□ 0.25
PTPRF-207ENST00000436724 PRRC2AP48634 2157 aaKnown RBP16.64■□□□□ 0.25
PTPRF-207ENST00000436724 CCDC168Q8NDH2 2452 aa16.63■□□□□ 0.25
PTPRF-207ENST00000436724 PSMB11A5LHX3 300 aa16.63■□□□□ 0.25
PTPRF-207ENST00000436724 NPPCP23582 126 aa16.63■□□□□ 0.25
PTPRF-207ENST00000436724 MORN5Q5VZ52 161 aa16.63■□□□□ 0.25
PTPRF-207ENST00000436724 C5orf56Q8N8D9 126 aa16.63■□□□□ 0.25
PTPRF-207ENST00000436724 C22orf15Q8WYQ4 148 aa16.63■□□□□ 0.25
PTPRF-207ENST00000436724 OR51M1Q9H341 326 aa16.63■□□□□ 0.25
PTPRF-207ENST00000436724 NPIPB5A8MRT5 1133 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 ATP6V0E1O15342 81 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 LY6EQ16553 131 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 GFI1BQ5VTD9 330 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 FUT9Q9Y231 359 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 ITPR2Q14571 2701 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 LINC00587B1AMM8 73 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 CXorf1O96002 111 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 IGHV4-31P0DP07 118 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 TMEM249Q2WGJ8 235 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 TTC9CQ8N5M4 171 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 RBM14Q96PK6 669 aaKnown RBP16.62■□□□□ 0.25
PTPRF-207ENST00000436724 UHRF2Q96PU4 802 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 PYGO2Q9BRQ0 406 aa16.62■□□□□ 0.25
PTPRF-207ENST00000436724 MDFIC2A0A1B0GVS7 189 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 H3BUX3 64 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 TGOLN2O43493 480 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 IGLV11-55A0A075B6I3 123 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 AMY1AP04745 511 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 OR5G3P0C626 314 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 ECSCRQ19T08 205 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 PATE2Q6UY27 113 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 OR4X1Q8NH49 305 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 TMUB1Q9BVT8 246 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 ITPR3Q14573 2671 aa16.61■□□□□ 0.25
PTPRF-207ENST00000436724 PDZD2O15018 2839 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 TRGV9Q99603 122 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 GAR1Q9NY12 217 aaKnown RBP16.6■□□□□ 0.25
PTPRF-207ENST00000436724 TRAV5A0A0B4J249 113 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 IGLC1P0CG04 106 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 GCHFRP30047 84 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 SELENOTP62341 195 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 BCL6BQ8N143 479 aaPredicted RBP16.6■□□□□ 0.25
PTPRF-207ENST00000436724 HIST3H2BBQ8N257 126 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 OR51G1Q8NGK1 321 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 SGMS2Q8NHU3 365 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 MBD6Q96DN6 1003 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 DNAJC4Q9NNZ3 241 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 MOB4Q9Y3A3 225 aa16.6■□□□□ 0.25
PTPRF-207ENST00000436724 C11orf94C9JXX5 98 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 ORM2P19652 201 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 ATP5G3P48201 142 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 PYY3Q5JQD4 70 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 NECAP1Q8NC96 275 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 OR1L6Q8NGR2 347 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 ZNF503Q96F45 646 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 GPR61Q9BZJ8 451 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 MXRA5Q9NR99 2828 aa16.59■□□□□ 0.25
PTPRF-207ENST00000436724 G3V318 75 aa16.58■□□□□ 0.25
PTPRF-207ENST00000436724 COX7A2P2O60397 106 aa16.58■□□□□ 0.25
PTPRF-207ENST00000436724 CST9LP1Q5W188 147 aa16.58■□□□□ 0.25
PTPRF-207ENST00000436724 UNQ5815/PRO19632Q6UWF5 114 aa16.58■□□□□ 0.25
PTPRF-207ENST00000436724 UNC79Q9P2D8 2635 aa16.58■□□□□ 0.24
PTPRF-207ENST00000436724 OR2J3O76001 311 aa16.58■□□□□ 0.24
PTPRF-207ENST00000436724 S100PP25815 95 aa16.58■□□□□ 0.24
PTPRF-207ENST00000436724 TIGITQ495A1 244 aa16.58■□□□□ 0.24
PTPRF-207ENST00000436724 SRD5A3Q9H8P0 318 aa16.58■□□□□ 0.24
PTPRF-207ENST00000436724 H7BYZ3 331 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 OR7C2O60412 319 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 S100A2P29034 98 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 C10orf113Q5VZT2 155 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 OR1B1Q8NGR6 318 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 C19orf24Q9BVV8 132 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 ELOA3CA0A087WX78 387 aaPredicted RBP16.57■□□□□ 0.24
PTPRF-207ENST00000436724 PPP1R2P9O14990 202 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 NDUFB8O95169 186 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 IGKV1-17P01599 117 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 IGHV3-23P01764 117 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 OR10J4P0C629 311 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms