RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 TCTAP57738 103 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 ACTL10Q5JWF8 245 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 SMDT1Q9H4I9 107 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 TRBV20OR9-2A0A075B6H5 130 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 PSG1P11464 419 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 OR5AN1Q8NGI8 311 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 PAX1P15863 534 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 IGHV4-39P01824 125 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 OR11H4Q8NGC9 324 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 SPOCK3Q9BQ16 436 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 A0A1B0GWJ7 208 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 FAM90A9PA6NNJ1 464 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 MAP1LC3AQ9H492 121 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 LRRK1Q38SD2 2015 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 G3V318 75 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 GNG5P63218 68 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 ELOBQ15370 118 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 OR10D4PQ8NGN7 298 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 PIEZO2Q9H5I5 2752 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 OR1N2Q8NGR9 330 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 DENND4CQ5VZ89 1909 aa13.89□□□□□ -0.19
SMARCA4-203ENST00000429416 IGHV2-5P01817 119 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 TMEM191AQ9H0A3 160 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 RIPPLY3P57055 190 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 F11RQ9Y624 299 aaKnown RBP13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 PRDM13Q9H4Q3 707 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 FAM223BA6NKX1 122 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 LDLRAD4O15165 306 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 CNTFRP26992 372 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 FXYD7P58549 80 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 DEFB112Q30KQ8 113 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 FAM223AQ8IWN6 122 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 M0R3E3 92 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 HSPB8Q9UJY1 196 aa13.88□□□□□ -0.19
SMARCA4-203ENST00000429416 TBX15Q96SF7 602 aa13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 UBE2E2Q96LR5 201 aa13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 RHPN1-AS1Q9BWJ2 59 aa13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 CCKARP32238 428 aa13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 RSPO3Q9BXY4 272 aaPredicted RBP13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 TRBV6-6A0A0A6YYG2 114 aa13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 TEX36Q5VZQ5 186 aa13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 ZNF562Q6V9R5 426 aa13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 OTORQ9NRC9 128 aa13.87□□□□□ -0.19
SMARCA4-203ENST00000429416 SCO2A0A1W2PP80 73 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 DKK1O94907 266 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 ATP5G3P48201 142 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 COL4A4P53420 1690 aaPredicted RBP13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 TMEM101Q96IK0 257 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 KCNS1Q96KK3 526 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 C22orf46C9J442 243 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 FCN3O75636 299 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 ID3Q02535 119 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 SRSF9Q13242 221 aaKnown RBP eCLIP13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 PMS2P5A8MQ11 134 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 IGHV4-59P01825 116 aa13.86□□□□□ -0.19
SMARCA4-203ENST00000429416 CD5P06127 495 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 STPG2Q8N412 459 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 SEM1Q6ZVN7 128 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 ZNF843Q8N446 348 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 ZNF415Q09FC8 603 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 GCSAMLQ5JQS6 135 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 GEMIN7Q9H840 131 aaKnown RBP13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 TRAV5A0A0B4J249 113 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 IGKV1-5P01602 117 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 NMBP08949 121 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 SCRT1Q9BWW7 348 aa13.85□□□□□ -0.19
SMARCA4-203ENST00000429416 LINC01619G3V211 115 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 SNRPEP62304 92 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 FMC1Q96HJ9 113 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 FABP5P3A8MUU1 101 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 HNRNPA3P51991 378 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 RSPO1Q2MKA7 263 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 OR11H1Q8NG94 326 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 DAZ1Q9NQZ3 744 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 TRAV21A0A0B4J279 112 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 OVOL1O14753 267 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 LMO1P25800 156 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 IQCJQ1A5X6 159 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 KIAA1644Q3SXP7 199 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 REC114Q7Z4M0 266 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 SUMO2P61956 95 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 QRFPP83859 136 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 ASCL4Q6XD76 172 aa13.84□□□□□ -0.19
SMARCA4-203ENST00000429416 DAZAP2Q15038 168 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-203ENST00000429416 NAV2Q8IVL1 2488 aa13.83□□□□□ -0.2
SMARCA4-203ENST00000429416 CIARTQ8N365 385 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-203ENST00000429416 PPIFP30405 207 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-203ENST00000429416 RPL13AP40429 203 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-203ENST00000429416 ZNF256Q9Y2P7 627 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-203ENST00000429416 MT-ND6P03923 174 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 SFRP2Q96HF1 295 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 IGHV2-70P01814 119 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 HLA-DQA1P01909 254 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 LHFPL1Q86WI0 220 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 ASCL2Q99929 193 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 HIST2H2BCQ6DN03 193 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 TREML4Q6UXN2 200 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 MMP23AO75900 390 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 FER1L6-AS1Q8NA97 138 aa13.82□□□□□ -0.2
SMARCA4-203ENST00000429416 TMEM183BQ1AE95 376 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms