RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SAMD10Q9BYL1 202 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 PLEKHA3Q9HB20 300 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 NPVFQ9HCQ7 196 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 FKBP11Q9NYL4 201 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 IL36BQ9NZH7 164 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 NAGKQ9UJ70 344 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 PRNDQ9UKY0 176 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 PSG11Q9UQ72 335 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 VCANP13611 3396 aa3.96□□□□□ -1.78
LINC00458-202ENST00000427299 TECTAO75443 2155 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 TRGV10A0A0A0MS01 117 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 NKX6-3A6NJ46 265 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 C17orf98A8MV24 154 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 M0R1X1 148 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 IGLV1-44P01699 117 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 IGHG3P01860 377 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 HLA-DQA1P01909 254 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 OR5G3P0C626 314 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 OR10J4P0C629 311 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 CRISP2P16562 243 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 IGHV1-2P23083 117 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 GCHFRP30047 84 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 CHRNB4P30926 498 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 RPL29P47914 159 aaKnown RBP3.95□□□□□ -1.78
LINC00458-202ENST00000427299 ATP5G3P48201 142 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 GNG4P50150 75 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 EDDM3BP56851 147 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 UBE2G2P60604 165 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 NUTF2P61970 127 aaKnown RBP3.95□□□□□ -1.78
LINC00458-202ENST00000427299 RPL30P62888 115 aaKnown RBP3.95□□□□□ -1.78
LINC00458-202ENST00000427299 ZNF90Q03938 601 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 AESQ08117 197 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 PSG7Q13046 419 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 SRSF9Q13242 221 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC00458-202ENST00000427299 C3AR1Q16581 482 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 POU2AF1Q16633 256 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 TIGITQ495A1 244 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 OR10J3Q5JRS4 329 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 C1orf194Q5T5A4 169 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 FAM162BQ5T6X4 162 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 FAM71F2Q6NXP2 309 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 PNKDQ8N490 385 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 SGMS2Q8NHU3 365 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 LRRC29Q8WV35 223 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 SMIM12Q96EX1 92 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 KCNS1Q96KK3 526 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 VAMP8Q9BV40 100 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 HES7Q9BYE0 225 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 COMMD5Q9GZQ3 224 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 VCX2Q9H322 139 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 PRO1933Q9H354 126 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 TECRQ9NZ01 308 aaKnown RBP3.95□□□□□ -1.78
LINC00458-202ENST00000427299 SPRR3Q9UBC9 169 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 ZNF257Q9Y2Q1 563 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 AHCTF1Q8WYP5 2266 aa3.95□□□□□ -1.78
LINC00458-202ENST00000427299 DSCAMO60469 2012 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 TRAV38-1A0A0B4J264 116 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 TRAV17A0A0B4J275 112 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 A0A1B0GV90 55 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 C15orf65H3BRN8 121 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 MMP23AO75900 390 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 LYZL6O75951 148 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 APOA2P02652 100 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 CD55P08174 381 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 OR9G9P0C7N8 305 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 CFHR2P36980 270 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 MPV17P39210 176 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 VDAC2P45880 294 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-202ENST00000427299 CEBPDP49716 269 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-202ENST00000427299 KLF3P57682 345 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-202ENST00000427299 RPL31P62899 125 aaKnown RBP3.94□□□□□ -1.78
LINC00458-202ENST00000427299 PRCDQ00LT1 54 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 EDDM3AQ14507 147 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 GUSBP1Q15486 140 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 CYB5R2Q6BCY4 276 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 TEX43Q6ZNM6 134 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 SSX8Q7RTT4 187 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 BAGE3Q86Y29 109 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 BAGE2Q86Y30 109 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 ZNF664Q8N3J9 261 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 CNEP1R1Q8N9A8 125 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 OR5AU1Q8NGC0 362 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 OR5B3Q8NH48 314 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 VSTM2AQ8TAG5 236 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 UBALD1Q8TB05 177 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 C22orf15Q8WYQ4 148 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 MGST2Q99735 147 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 C20orf144Q9BQM9 153 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 GNB1LQ9BYB4 327 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 OPN3Q9H1Y3 402 aaPredicted RBP3.94□□□□□ -1.78
LINC00458-202ENST00000427299 GAL3ST2Q9H3Q3 398 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 PATZ1Q9HBE1 687 aaKnown RBP3.94□□□□□ -1.78
LINC00458-202ENST00000427299 CALYQ9NYX4 217 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 CACNA1DQ01668 2161 aa3.94□□□□□ -1.78
LINC00458-202ENST00000427299 PRUNE2Q8WUY3 3088 aa3.93□□□□□ -1.78
LINC00458-202ENST00000427299 IGHV4-4A0A075B6R2 117 aa3.93□□□□□ -1.78
LINC00458-202ENST00000427299 IGHV3-43A0A0B4J1X8 118 aa3.93□□□□□ -1.78
LINC00458-202ENST00000427299 TRAV39A0A0B4J263 110 aa3.93□□□□□ -1.78
LINC00458-202ENST00000427299 IGHV2OR16-5A0A0B4J2B6 119 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms