RNA–Protein interactions for RNA: ENST00000425428.6

CD44-207, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,768 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-207ENST00000425428 METTL26Q96S19 204 aa7.8□□□□□ -1.16
CD44-207ENST00000425428 PBDC1Q9BVG4 233 aa7.8□□□□□ -1.16
CD44-207ENST00000425428 NPCDR1Q9BY65 106 aa7.8□□□□□ -1.16
CD44-207ENST00000425428 TMEM231Q9H6L2 316 aa7.8□□□□□ -1.16
CD44-207ENST00000425428 TIMM9Q9Y5J7 89 aa7.8□□□□□ -1.16
CD44-207ENST00000425428 ELOA3CA0A087WX78 387 aaPredicted RBP7.79□□□□□ -1.16
CD44-207ENST00000425428 A0A1W2PS18 150 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 COX7A2P2O60397 106 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 IL4P05112 153 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 LINC00869P0C866 280 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 HOXD3P31249 432 aaPredicted RBP7.79□□□□□ -1.16
CD44-207ENST00000425428 RPL29P47914 159 aaKnown RBP7.79□□□□□ -1.16
CD44-207ENST00000425428 NKX2-5P52952 324 aaPredicted RBP7.79□□□□□ -1.16
CD44-207ENST00000425428 LYZP61626 148 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 B2MP61769 119 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 SERF2P84101 59 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 ACOT6Q3I5F7 207 aaPredicted RBP7.79□□□□□ -1.16
CD44-207ENST00000425428 AKR1C8PQ5T2L2 129 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 RPL7L1Q6DKI1 246 aaKnown RBP7.79□□□□□ -1.16
CD44-207ENST00000425428 C1QL4Q86Z23 238 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 C9orf62Q8N4C0 152 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 RNF2Q99496 336 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 RABAC1Q9UI14 185 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 PUS1Q9Y606 427 aaKnown RBP eCLIP7.79□□□□□ -1.16
CD44-207ENST00000425428 IGHV4OR15-8A0A075B7B6 117 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 A0A087WW49 117 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 HYPMO75409 117 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 OR5G3P0C626 314 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 PSG1P11464 419 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 ORM2P19652 201 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 NPPCP23582 126 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 DEFB136Q30KP8 78 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 BAP18Q8IXM2 172 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 STPG3Q8N7X2 389 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 OR1B1Q8NGR6 318 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 OR2G3Q8NGZ4 309 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 MGST2Q99735 147 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 PSMG3Q9BT73 122 aaPredicted RBP7.79□□□□□ -1.16
CD44-207ENST00000425428 CHRDL1Q9BU40 450 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 SLC39A9Q9NUM3 307 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 LSM4Q9Y4Z0 139 aaKnown RBP7.79□□□□□ -1.16
CD44-207ENST00000425428 PXMP4Q9Y6I8 212 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 WNK1Q9H4A3 2382 aa7.79□□□□□ -1.16
CD44-207ENST00000425428 IGHV3-35A0A0C4DH35 117 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 A0A1W2PPV4 95 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 BOLA2-SMG1P6H3BVE0 249 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 IGKV1-17P01599 117 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 ELLP55199 621 aaPredicted RBP7.78□□□□□ -1.16
CD44-207ENST00000425428 ZNF90Q03938 601 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 FFAR4Q5NUL3 377 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 RNF125Q96EQ8 232 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 GGTLC1Q9BX51 225 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 WFDC1Q9HC57 220 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 DAZ1Q9NQZ3 744 aaKnown RBP7.78□□□□□ -1.16
CD44-207ENST00000425428 MRPL36Q9P0J6 103 aaKnown RBP7.78□□□□□ -1.16
CD44-207ENST00000425428 HIGD1AQ9Y241 93 aa7.78□□□□□ -1.16
CD44-207ENST00000425428 LGALS9O00182 355 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 TRBV12-3P01733 135 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 ATP6V0CP27449 155 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 SYNJ2BPP57105 145 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 C10orf113Q5VZT2 155 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 STOML3Q8TAV4 291 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 MARC2Q969Z3 335 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 RAX2Q96IS3 184 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 RSG1Q9BU20 258 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 SLC25A32Q9H2D1 315 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 DNAJC4Q9NNZ3 241 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 SLC45A2Q9UMX9 530 aa7.77□□□□□ -1.17
CD44-207ENST00000425428 UMAD1C9J7I0 102 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 F8W735 103 aaPredicted RBP7.76□□□□□ -1.17
CD44-207ENST00000425428 TEX46H3BTG2 121 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 K7EMT4 169 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 OVOL1O14753 267 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 CD5P06127 495 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 SEC11BP0C7V7 166 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 CD33P20138 364 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 ADMP35318 185 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 SLURP1P55000 103 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 TAS2R45P59539 299 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 MIC13Q5XKP0 118 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 TOMM20LQ6UXN7 152 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 C18orf65Q6ZTR6 163 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 REC114Q7Z4M0 266 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 DYNLRB2Q8TF09 96 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 GATAD1Q8WUU5 269 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 TMEM190Q8WZ59 177 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 MCRIP2Q9BUT9 160 aaKnown RBP7.76□□□□□ -1.17
CD44-207ENST00000425428 GPR61Q9BZJ8 451 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 IGKV1D-37A0A075B6S9 117 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 IGKV1OR2-108A0A075B7D4 117 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 M6PRP20645 277 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 RAB5CP51148 216 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 KRTAP10-3P60369 221 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 RAB2AP61019 212 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 RHOBP62745 196 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 KLF5Q13887 457 aaPredicted RBP7.76□□□□□ -1.17
CD44-207ENST00000425428 OR9G4Q8NGQ1 327 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 ST8SIA2Q92186 375 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 PHYHIPLQ96FC7 376 aa7.76□□□□□ -1.17
CD44-207ENST00000425428 DUX3Q96PT4 197 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms