RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 IGHV4-4A0A075B6R2 117 aa11.7□□□□□ -0.54
COL18A1-205ENST00000423214 IL4P05112 153 aa11.7□□□□□ -0.54
COL18A1-205ENST00000423214 NUTF2P61970 127 aaKnown RBP11.7□□□□□ -0.54
COL18A1-205ENST00000423214 AARDQ4LEZ3 155 aa11.7□□□□□ -0.54
COL18A1-205ENST00000423214 C2orf83Q53S99 150 aa11.7□□□□□ -0.54
COL18A1-205ENST00000423214 ETFRF1Q6IPR1 90 aa11.7□□□□□ -0.54
COL18A1-205ENST00000423214 C16orf54Q6UWD8 224 aa11.7□□□□□ -0.54
COL18A1-205ENST00000423214 C1QTNF4Q9BXJ3 329 aa11.7□□□□□ -0.54
COL18A1-205ENST00000423214 X6R8D5 127 aa11.7□□□□□ -0.54
COL18A1-205ENST00000423214 SULT1A3P0DMM9 295 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 SULT1A4P0DMN0 295 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 NPY1RP25929 384 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 AP3S2P59780 193 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 YPEL3P61236 119 aaPredicted RBP11.69□□□□□ -0.54
COL18A1-205ENST00000423214 PRSS54Q6PEW0 395 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 NOXA1Q86UR1 476 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 IL22RA2Q969J5 263 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 ACY3Q96HD9 319 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 RAB40CQ96S21 281 aa11.69□□□□□ -0.54
COL18A1-205ENST00000423214 ELOA3CA0A087WX78 387 aaPredicted RBP11.68□□□□□ -0.54
COL18A1-205ENST00000423214 FAM90A26D6RGX4 464 aa11.68□□□□□ -0.54
COL18A1-205ENST00000423214 ZNF701M0R085 212 aaPredicted RBP11.68□□□□□ -0.54
COL18A1-205ENST00000423214 USF2Q15853 346 aaPredicted RBP11.68□□□□□ -0.54
COL18A1-205ENST00000423214 SPANXN2Q5MJ10 180 aa11.68□□□□□ -0.54
COL18A1-205ENST00000423214 SIGLEC15Q6ZMC9 328 aa11.68□□□□□ -0.54
COL18A1-205ENST00000423214 RNF126Q9BV68 326 aa11.68□□□□□ -0.54
COL18A1-205ENST00000423214 NRN1Q9NPD7 142 aa11.68□□□□□ -0.54
COL18A1-205ENST00000423214 CACFD1Q9UGQ2 172 aa11.68□□□□□ -0.54
COL18A1-205ENST00000423214 U3KQE9 123 aa11.68□□□□□ -0.54
COL18A1-205ENST00000423214 A0A0B4J2A0 478 aa11.67□□□□□ -0.54
COL18A1-205ENST00000423214 ANXA3P12429 323 aa11.67□□□□□ -0.54
COL18A1-205ENST00000423214 NUP62P37198 522 aaPredicted RBP11.67□□□□□ -0.54
COL18A1-205ENST00000423214 NMSQ5H8A3 153 aa11.67□□□□□ -0.54
COL18A1-205ENST00000423214 LGI3Q8N145 548 aa11.67□□□□□ -0.54
COL18A1-205ENST00000423214 NPIPB3Q92617 1050 aa11.67□□□□□ -0.54
COL18A1-205ENST00000423214 SRRQ9GZT4 340 aa11.67□□□□□ -0.54
COL18A1-205ENST00000423214 SHPKQ9UHJ6 478 aa11.67□□□□□ -0.54
COL18A1-205ENST00000423214 CELA1Q9UNI1 258 aa11.67□□□□□ -0.54
COL18A1-205ENST00000423214 HERC2O95714 4834 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 DEFB131BA0A096LNP1 70 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 LINC00854A0A1B0GVQ3 168 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 TOMM40O96008 361 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 IFNA10P01566 189 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 AMBPP02760 352 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 RD3LP0DJH9 198 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 VAMP1P23763 118 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 CCR6P51684 374 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 SMCO1Q147U7 214 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 BAK1Q16611 211 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 TMEM128Q5BJH2 165 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 CSNK1G2-AS1Q8NCQ2 148 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 TMEM170AQ8WVE7 144 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 KRTAP17-1Q9BYP8 105 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 RBKSQ9H477 322 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 XCL2Q9UBD3 114 aa11.66□□□□□ -0.54
COL18A1-205ENST00000423214 ZNF767PQ75MW2 155 aa11.65□□□□□ -0.54
COL18A1-205ENST00000423214 OR1S1Q8NH92 325 aa11.65□□□□□ -0.54
COL18A1-205ENST00000423214 SLC25A21Q9BQT8 299 aaPredicted RBP11.65□□□□□ -0.54
COL18A1-205ENST00000423214 PBDC1Q9BVG4 233 aa11.65□□□□□ -0.54
COL18A1-205ENST00000423214 SEPSECSQ9HD40 501 aaKnown RBP11.65□□□□□ -0.54
COL18A1-205ENST00000423214 PFDN2Q9UHV9 154 aa11.65□□□□□ -0.54
COL18A1-205ENST00000423214 HLA-DRB4P13762 266 aa11.64□□□□□ -0.55
COL18A1-205ENST00000423214 INPP1P49441 399 aa11.64□□□□□ -0.55
COL18A1-205ENST00000423214 SRPXP78539 464 aa11.64□□□□□ -0.55
COL18A1-205ENST00000423214 OR51G1Q8NGK1 321 aa11.64□□□□□ -0.55
COL18A1-205ENST00000423214 RNF125Q96EQ8 232 aa11.64□□□□□ -0.55
COL18A1-205ENST00000423214 HSPB7Q9UBY9 170 aa11.64□□□□□ -0.55
COL18A1-205ENST00000423214 HLA-DRB4X5D2U9 266 aa11.64□□□□□ -0.55
COL18A1-205ENST00000423214 H3BMM0 161 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 BUB3O43684 328 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 P0DMU3 169 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 FAM231AP0DMU4 169 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 FAM231CP0DMU5 169 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 PSG1P11464 419 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 NKX2-1P43699 371 aaPredicted RBP11.63□□□□□ -0.55
COL18A1-205ENST00000423214 PPP1R1AQ13522 171 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 C12orf74Q32Q52 190 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 TRIQKQ629K1 86 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 LINC00336Q6ZUF6 198 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 DTD1Q8TEA8 209 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 SDHCQ99643 169 aaPredicted RBP11.63□□□□□ -0.55
COL18A1-205ENST00000423214 NDUFAF3Q9BU61 184 aa11.63□□□□□ -0.55
COL18A1-205ENST00000423214 ZFP92A6NM28 416 aa11.62□□□□□ -0.55
COL18A1-205ENST00000423214 SFT2D2O95562 160 aa11.62□□□□□ -0.55
COL18A1-205ENST00000423214 HOXB5P09067 269 aa11.62□□□□□ -0.55
COL18A1-205ENST00000423214 OR8G2PQ6IF36 304 aa11.62□□□□□ -0.55
COL18A1-205ENST00000423214 COQ8AQ8NI60 647 aa11.62□□□□□ -0.55
COL18A1-205ENST00000423214 DEDD2Q8WXF8 326 aa11.62□□□□□ -0.55
COL18A1-205ENST00000423214 SLC35E1Q96K37 410 aa11.62□□□□□ -0.55
COL18A1-205ENST00000423214 U3KQ87 197 aa11.62□□□□□ -0.55
COL18A1-205ENST00000423214 IGHV3OR16-12A0A075B7B8 117 aa11.61□□□□□ -0.55
COL18A1-205ENST00000423214 PITX3O75364 302 aa11.61□□□□□ -0.55
COL18A1-205ENST00000423214 IGKV3-20P01619 116 aa11.61□□□□□ -0.55
COL18A1-205ENST00000423214 IAPPP10997 89 aa11.61□□□□□ -0.55
COL18A1-205ENST00000423214 ID1P41134 155 aa11.61□□□□□ -0.55
COL18A1-205ENST00000423214 FLVCR2Q9UPI3 526 aa11.61□□□□□ -0.55
COL18A1-205ENST00000423214 DUXBA0A1W2PPF3 345 aa11.6□□□□□ -0.55
COL18A1-205ENST00000423214 TMEM189A5PLL7 270 aa11.6□□□□□ -0.55
COL18A1-205ENST00000423214 FABP1P07148 127 aa11.6□□□□□ -0.55
COL18A1-205ENST00000423214 EMP1P54849 157 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms