RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 BPIFB3P59826 476 aa13.42□□□□□ -0.26
NPC1L1-203ENST00000423141 OR1L4Q8NGR5 311 aa13.42□□□□□ -0.26
NPC1L1-203ENST00000423141 HARBI1Q96MB7 349 aa13.42□□□□□ -0.26
NPC1L1-203ENST00000423141 PLCE1Q9P212 2302 aa13.42□□□□□ -0.26
NPC1L1-203ENST00000423141 C7orf71A4D174 169 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 C19orf71A6NCJ1 209 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 PPIAL4DF5H284 164 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 FAM71F2Q6NXP2 309 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 C9orf106Q8NAJ2 232 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 MRPL20Q9BYC9 149 aaKnown RBP13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 KLF12Q9Y4X4 402 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 NCOR1O75376 2440 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 CGB1A6NKQ9 187 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 NCR2O95944 276 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 LHBP01229 141 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 IGLV1-44P01699 117 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 HLA-DRB1P01911 266 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 RIPPLY3P57055 190 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 ARF6P62330 175 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 ERHP84090 104 aaKnown RBP13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 GUSBP1Q15486 140 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 PET117Q6UWS5 81 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 TDHQ8IZJ6 230 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 FAM216BQ8N7L0 139 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 RBMXL3Q8N7X1 1067 aaKnown RBP13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 MEGF9Q9H1U4 602 aa13.41□□□□□ -0.26
NPC1L1-203ENST00000423141 TRAV8-1A0A0A6YYK1 113 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 CHEK1O14757 476 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 PRB4P10163 310 aaPredicted RBP13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 CFHR2P36980 270 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 ATP5IP56385 69 aaPredicted RBP13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 MZT1Q08AG7 82 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 SLC25A48Q6ZT89 311 aaKnown RBP13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 OR1B1Q8NGR6 318 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 KLK10O43240 276 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 IGLC1P0CG04 106 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 UQCRFS1P47985 274 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 RBPMS2Q6ZRY4 209 aaKnown RBP13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 CCL13Q99616 98 aa13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 PEF1Q9UBV8 284 aaKnown RBP13.4□□□□□ -0.26
NPC1L1-203ENST00000423141 K7ERU9 68 aa13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 NAA38Q9BRA0 125 aaKnown RBP13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 RAI1Q7Z5J4 1906 aaPredicted RBP13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 CACNA1GO43497 2377 aa13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 TMEM265A0A087WTH1 108 aa13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 FAM231BA6NCW3 169 aa13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 LTAP01374 205 aa13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 TCTAP57738 103 aa13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 LINC01545Q5VT33 79 aa13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 NEU4Q8WWR8 484 aaPredicted RBP13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 NDFIP1Q9BT67 221 aa13.39□□□□□ -0.27
NPC1L1-203ENST00000423141 C22orf46C9J442 243 aa13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 APOA2P02652 100 aa13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 OR5AL1P0C617 328 aa13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 SP9P0CG40 484 aa13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 COX8AP10176 69 aa13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 PEAR1Q5VY43 1037 aaPredicted RBP13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 CIARTQ8N365 385 aaPredicted RBP13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 MS4A6AQ9H2W1 248 aa13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 NBEAP1P0C6P0 100 aa13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 RPUSD1Q9UJJ7 312 aaKnown RBP13.38□□□□□ -0.27
NPC1L1-203ENST00000423141 CT83Q5H943 113 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 DAZAP1Q96EP5 407 aaKnown RBP13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 GAFA1Q96PS6 74 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 JMJD8Q96S16 334 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 ASCL2Q99929 193 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 HSPB8Q9UJY1 196 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 APOHP02749 345 aaPredicted RBP13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 FAM87AP0C7U9 286 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 HTR1DP28221 377 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 DIAPH2-AS1Q14236 149 aa13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 SOX21Q9Y651 276 aaPredicted RBP13.37□□□□□ -0.27
NPC1L1-203ENST00000423141 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 IGHV3-21A0A0B4J1V1 117 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 GAGE10A6NGK3 116 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 TCRAP04437 139 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 BPIFA4PQ86YQ2 179 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 RAB9BQ9NP90 201 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 KALRNO60229 2985 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 OVOL3O00110 214 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 TMEM97Q5BJF2 176 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 THAP8Q8NA92 274 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 C1orf162Q8NEQ5 155 aaPredicted RBP13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 OSR1Q8TAX0 266 aaPredicted RBP13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 Q9H3A6 140 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 ZNF492Q9P255 531 aa13.36□□□□□ -0.27
NPC1L1-203ENST00000423141 FAM106CPP0CH98 169 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 COL8A1P27658 744 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 FAM106AQ4KMX7 169 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 SMIM12Q96EX1 92 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 PERPQ96FX8 193 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 FMC1Q96HJ9 113 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 ZNF747Q9BV97 191 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 APELAP0DMC3 54 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 ZNF833PQ6ZTB9 187 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 C5orf17Q8NAS9 161 aa13.35□□□□□ -0.27
NPC1L1-203ENST00000423141 FLYWCH2Q96CP2 140 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms