RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 WRBO00258 174 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 BUB3O43684 328 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 ADAP1O75689 374 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 OR4E1P0C645 316 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 BTCP35070 178 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 DHRS2Q13268 280 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 CNPY1Q3B7I2 92 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 GATAD1Q8WUU5 269 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 RNF125Q96EQ8 232 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
LINC00404-201ENST00000418660 RYR3Q15413 4870 aa12.1□□□□□ -0.47
LINC00404-201ENST00000418660 FABP1P07148 127 aa12.09□□□□□ -0.47
LINC00404-201ENST00000418660 ID3Q02535 119 aa12.09□□□□□ -0.47
LINC00404-201ENST00000418660 ZNF90Q03938 601 aa12.09□□□□□ -0.47
LINC00404-201ENST00000418660 OR8G2PQ6IF36 304 aa12.09□□□□□ -0.47
LINC00404-201ENST00000418660 STHQ8IWL8 128 aa12.09□□□□□ -0.47
LINC00404-201ENST00000418660 PFDN2Q9UHV9 154 aa12.09□□□□□ -0.47
LINC00404-201ENST00000418660 DYNC2H1Q8NCM8 4307 aaKnown RBP12.09□□□□□ -0.47
LINC00404-201ENST00000418660 IFNA21P01568 189 aa12.08□□□□□ -0.48
LINC00404-201ENST00000418660 ZNF688P0C7X2 276 aa12.08□□□□□ -0.48
LINC00404-201ENST00000418660 ATF4P18848 351 aaPredicted RBP12.08□□□□□ -0.48
LINC00404-201ENST00000418660 ANXA7P20073 488 aaKnown RBP12.08□□□□□ -0.48
LINC00404-201ENST00000418660 NUP62P37198 522 aaPredicted RBP12.08□□□□□ -0.48
LINC00404-201ENST00000418660 C4orf46Q504U0 113 aa12.08□□□□□ -0.48
LINC00404-201ENST00000418660 TRGV9Q99603 122 aa12.08□□□□□ -0.48
LINC00404-201ENST00000418660 PBDC1Q9BVG4 233 aa12.08□□□□□ -0.48
LINC00404-201ENST00000418660 SNRPGP15A8MWD9 76 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 PRSS46E5RG02 174 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 PLA2G10O15496 165 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 CA1P00915 261 aaPredicted RBP12.07□□□□□ -0.48
LINC00404-201ENST00000418660 EWSR1Q01844 656 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINC00404-201ENST00000418660 SPANXN5Q5MJ07 72 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 SIGLEC15Q6ZMC9 328 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 TMEM217Q8N7C4 229 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 THAP8Q8NA92 274 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 RARRES2Q99969 163 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 NRN1Q9NPD7 142 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 TENM2Q9NT68 2774 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 CSMD3Q7Z407 3707 aa12.07□□□□□ -0.48
LINC00404-201ENST00000418660 NKX2-1P43699 371 aaPredicted RBP12.06□□□□□ -0.48
LINC00404-201ENST00000418660 TRPT1Q86TN4 253 aaKnown RBP12.06□□□□□ -0.48
LINC00404-201ENST00000418660 OR4D5Q8NGN0 318 aa12.06□□□□□ -0.48
LINC00404-201ENST00000418660 SEPSECSQ9HD40 501 aaKnown RBP12.06□□□□□ -0.48
LINC00404-201ENST00000418660 STRAPQ9Y3F4 350 aaKnown RBP12.06□□□□□ -0.48
LINC00404-201ENST00000418660 IGKV1OR2-108A0A075B7D4 117 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 KNCNA6PVL3 124 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 H3BP45 60 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 LYRM1O43325 122 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 JTBO76095 146 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 CFDP00746 253 aaPredicted RBP12.05□□□□□ -0.48
LINC00404-201ENST00000418660 LYZP61626 148 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 SNRPD3P62318 126 aaKnown RBP12.05□□□□□ -0.48
LINC00404-201ENST00000418660 POLR2GP62487 172 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00404-201ENST00000418660 OR2F1Q13607 317 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 PSMG4Q5JS54 123 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 MORN3Q6PF18 240 aaPredicted RBP12.05□□□□□ -0.48
LINC00404-201ENST00000418660 OR11H2Q8NH07 326 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 MITD1Q8WV92 249 aa12.05□□□□□ -0.48
LINC00404-201ENST00000418660 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 SPP1P10451 314 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 TMEM41BQ5BJD5 291 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 ACTL10Q5JWF8 245 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 RAB40CQ96S21 281 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 C20orf85Q9H1P6 137 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 PSENENQ9NZ42 101 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 FBXL17Q9UF56 701 aa12.04□□□□□ -0.48
LINC00404-201ENST00000418660 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
LINC00404-201ENST00000418660 PMS2P11Q13670 270 aa12.03□□□□□ -0.48
LINC00404-201ENST00000418660 IAH1Q2TAA2 248 aaPredicted RBP12.03□□□□□ -0.48
LINC00404-201ENST00000418660 LINC00299Q6ZSB3 139 aa12.03□□□□□ -0.48
LINC00404-201ENST00000418660 SMIM8Q96KF7 97 aa12.03□□□□□ -0.48
LINC00404-201ENST00000418660 CCDC32Q9BV29 185 aa12.03□□□□□ -0.48
LINC00404-201ENST00000418660 NUPR2A6NF83 97 aa12.02□□□□□ -0.49
LINC00404-201ENST00000418660 SSSCA1O60232 199 aa12.02□□□□□ -0.49
LINC00404-201ENST00000418660 TCRBP04435 133 aa12.02□□□□□ -0.49
LINC00404-201ENST00000418660 GIG44P09565 113 aaPredicted RBP12.02□□□□□ -0.49
LINC00404-201ENST00000418660 ACOT7LQ6ZUV0 252 aa12.02□□□□□ -0.49
LINC00404-201ENST00000418660 ZBTB8BQ8NAP8 495 aaPredicted RBP12.02□□□□□ -0.49
LINC00404-201ENST00000418660 PPP1R14BQ96C90 147 aa12.02□□□□□ -0.49
LINC00404-201ENST00000418660 C11orf68Q9H3H3 251 aaKnown RBP12.02□□□□□ -0.49
LINC00404-201ENST00000418660 SLC45A2Q9UMX9 530 aa12.02□□□□□ -0.49
LINC00404-201ENST00000418660 PMS2P5A8MQ11 134 aa12.01□□□□□ -0.49
LINC00404-201ENST00000418660 PAX9P55771 341 aa12.01□□□□□ -0.49
LINC00404-201ENST00000418660 AKR1C1Q04828 323 aa12.01□□□□□ -0.49
LINC00404-201ENST00000418660 CEMP1Q6PRD7 247 aaPredicted RBP12.01□□□□□ -0.49
LINC00404-201ENST00000418660 TMEM144Q7Z5S9 345 aa12.01□□□□□ -0.49
LINC00404-201ENST00000418660 BPIFCQ8NFQ6 507 aa12.01□□□□□ -0.49
LINC00404-201ENST00000418660 SCGB1D2O95969 90 aa12□□□□□ -0.49
LINC00404-201ENST00000418660 C4BPBP20851 252 aa12□□□□□ -0.49
LINC00404-201ENST00000418660 ID1P41134 155 aa12□□□□□ -0.49
LINC00404-201ENST00000418660 TAS2R30P59541 319 aa12□□□□□ -0.49
LINC00404-201ENST00000418660 TMEM14EPQ6UXP3 125 aa12□□□□□ -0.49
LINC00404-201ENST00000418660 OR8I2Q8N0Y5 310 aa12□□□□□ -0.49
LINC00404-201ENST00000418660 GSKIPQ9P0R6 139 aa12□□□□□ -0.49
LINC00404-201ENST00000418660 TRAV6A0A075B6T7 132 aa11.99□□□□□ -0.49
LINC00404-201ENST00000418660 H3BMM0 161 aa11.99□□□□□ -0.49
LINC00404-201ENST00000418660 GATA2P23769 480 aaPredicted RBP11.99□□□□□ -0.49
LINC00404-201ENST00000418660 TMEM182Q6ZP80 229 aaPredicted RBP11.99□□□□□ -0.49
LINC00404-201ENST00000418660 S100ZQ8WXG8 99 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms