RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 NBR2O15453 112 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 COX6B1P14854 86 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 ERG28Q9UKR5 140 aa9.95□□□□□ -0.82
UBR4-205ENST00000417040 LILRA1O75019 489 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 SRSF6Q13247 344 aaKnown RBP9.94□□□□□ -0.82
UBR4-205ENST00000417040 TRGV2A0A075B6R0 118 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 A0A0G2JRQ6 117 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 M0R2P5 195 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 Q8TAT8 98 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 MS4A6AQ9H2W1 248 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 CYSLTR1Q9Y271 337 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 KIAA0100Q14667 2235 aaKnown RBP9.94□□□□□ -0.82
UBR4-205ENST00000417040 A0A1B0GW64 132 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 MALP21145 153 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 NTF4P34130 210 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 COLCA1Q6ZS62 124 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 IMMP1LQ96LU5 166 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 NPSP0C0P6 89 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 PAX1P15863 534 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 MLANAQ16655 118 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 LINC00479Q96M42 142 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 NXT2Q9NPJ8 142 aaKnown RBP9.94□□□□□ -0.82
UBR4-205ENST00000417040 UNC13CQ8NB66 2214 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 GAGE2BQ13066 116 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 MST1LQ2TV78 715 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 GAGE2EQ4V326 116 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 CFAP161Q6P656 301 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 ADAMTSL5Q6ZMM2 481 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 SLC25A2Q9BXI2 301 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 EDA2RQ9HAV5 297 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 GAGE2DQ9UEU5 116 aa9.94□□□□□ -0.82
UBR4-205ENST00000417040 STPG4Q8N801 248 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 WNK3Q9BYP7 1800 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 HEATR5BQ9P2D3 2071 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 PRSS57Q6UWY2 283 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 SPRR3Q9UBC9 169 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 SYS1-DBNDD2H3BUS1 97 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 FBLN5Q9UBX5 448 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 IGHV1-18A0A0C4DH31 117 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 SP9P0CG40 484 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 A8MWP6 167 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 PF4P02776 101 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 RHOGP84095 191 aa9.93□□□□□ -0.82
UBR4-205ENST00000417040 SH2D1AO60880 128 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 BRCA1P38398 1863 aaKnown RBP9.92□□□□□ -0.82
UBR4-205ENST00000417040 F5P12259 2224 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 FAM90A2PQ658T7 463 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 C17orf100A8MU93 164 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 TNFRSF6BO95407 300 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 NDPQ00604 133 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 GATD1Q8NB37 220 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 VWCEQ96DN2 955 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 J3QW42 95 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 TIMM23O14925 209 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 NMSQ5H8A3 153 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 SNHG12Q9BXW3 62 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 SLC25A39Q9BZJ4 359 aaPredicted RBP9.92□□□□□ -0.82
UBR4-205ENST00000417040 COX11Q9Y6N1 276 aa9.92□□□□□ -0.82
UBR4-205ENST00000417040 RALGAPA2Q2PPJ7 1873 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 PSPNO60542 156 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 ZIC4Q8N9L1 334 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 ZNF625Q96I27 306 aaPredicted RBP9.91□□□□□ -0.82
UBR4-205ENST00000417040 LINC00473A8K010 186 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 SPINK8P0C7L1 97 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 CRYGSP22914 178 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 KLRD1Q13241 179 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 PVRIGQ6DKI7 326 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 NABP1Q96AH0 204 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 ZNF48Q96MX3 618 aaPredicted RBP9.91□□□□□ -0.82
UBR4-205ENST00000417040 COLQQ9Y215 455 aaPredicted RBP9.91□□□□□ -0.82
UBR4-205ENST00000417040 SIPA1L1O43166 1804 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 TMEM8BA6NDV4 472 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 GFRA3O60609 400 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 ORMDL2Q53FV1 153 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 TMEM133Q9H2Q1 129 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 MPDZO75970 2070 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 LINC00158P58513 81 aa9.91□□□□□ -0.82
UBR4-205ENST00000417040 CD177Q8N6Q3 437 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 TMEM158Q8WZ71 300 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 FOXF2Q12947 444 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 KLF17Q5JT82 389 aaPredicted RBP9.9□□□□□ -0.82
UBR4-205ENST00000417040 SIGLEC15Q6ZMC9 328 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 PNRC2Q9NPJ4 139 aaKnown RBP9.9□□□□□ -0.82
UBR4-205ENST00000417040 LCTP09848 1927 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 TMEM249Q2WGJ8 235 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 C11orf44Q8N8P7 122 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 FAM231BA6NCW3 169 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 ATXN8Q156A1 80 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 C20orf204Q6ZNR8 217 aa9.9□□□□□ -0.82
UBR4-205ENST00000417040 CITED2Q99967 270 aaPredicted RBP9.9□□□□□ -0.82
UBR4-205ENST00000417040 TRAV8-3A0A0A6YYJ7 113 aa9.9□□□□□ -0.83
UBR4-205ENST00000417040 AMN1Q8IY45 258 aa9.9□□□□□ -0.83
UBR4-205ENST00000417040 TRAV1-1A0A0B4J248 108 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 QRFPP83859 136 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 ERCC8Q13216 396 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 OR9G4Q8NGQ1 327 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 TMEM167AQ8TBQ9 72 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 ZNF329Q86UD4 541 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 YAE1D1Q9NRH1 226 aa9.89□□□□□ -0.83
UBR4-205ENST00000417040 E9PLN8 166 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms