RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 EXOSC2Q13868 293 aaKnown RBP3.32□□□□□ -1.88
PTPRK-209ENST00000415046 ZNF846Q147U1 533 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 SURF2Q15527 256 aaPredicted RBP3.32□□□□□ -1.88
PTPRK-209ENST00000415046 AKIRIN2Q53H80 203 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 SGPP2Q8IWX5 399 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 COMMD1Q8N668 190 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 TCTEX1D1Q8N7M0 179 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 ZNF491Q8N8L2 437 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 MINDY2Q8NBR6 621 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 OR4F17Q8NGA8 305 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 OR10W1Q8NGF6 305 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 LHFPL5Q8TAF8 219 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 S100ZQ8WXG8 99 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 TMEM230Q96A57 120 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 SEC22AQ96IW7 307 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 SCGB3A2Q96PL1 93 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 OR4F4Q96R69 305 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 SPIN2AQ99865 258 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 SPIN2BQ9BPZ2 258 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 TMEM222Q9H0R3 208 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 FAM212BQ9NTI7 297 aaPredicted RBP3.32□□□□□ -1.88
PTPRK-209ENST00000415046 SLC2A8Q9NY64 477 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 FLVCR2Q9UPI3 526 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 OR51B2Q9Y5P1 312 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 S4R3C0 116 aa3.32□□□□□ -1.88
PTPRK-209ENST00000415046 TRAV6A0A075B6T7 132 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 IGHV3-21A0A0B4J1V1 117 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 A0A0G2JRQ6 117 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 TEX50A0A1B0GTY4 177 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 IGLC7A0M8Q6 106 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 NAP1L6A6NFF2 107 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 C15orf61A6NNL5 157 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 PLA2G10O15496 165 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 LYRM1O43325 122 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 ATG12O94817 140 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 IGHV3-23P01764 117 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 TRAPPC2P0DI81 140 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 TRAPPC2BP0DI82 140 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 OR13C7P0DN81 318 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 UCP1P25874 307 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 BTCP35070 178 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 RAB9AP51151 201 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 SUPT4H1P63272 117 aaKnown RBP3.31□□□□□ -1.88
PTPRK-209ENST00000415046 RHOGP84095 191 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 DHODHQ02127 395 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 RIGQ13278 110 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 PPP1R1AQ13522 171 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 POU2AF1Q16633 256 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 SLC25A42Q86VD7 318 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 STHQ8IWL8 128 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 SELENOHQ8IZQ5 122 aaKnown RBP3.31□□□□□ -1.88
PTPRK-209ENST00000415046 CENPSQ8N2Z9 138 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 SLC35G3Q8N808 338 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 OR1L8Q8NGR8 309 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 OR4A5Q8NH83 315 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 GLYATL2Q8WU03 294 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 C4orf3Q8WVX3 66 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 RBPMSQ93062 196 aaKnown RBP3.31□□□□□ -1.88
PTPRK-209ENST00000415046 TSC22D3Q99576 134 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 ALKBH7Q9BT30 221 aaPredicted RBP3.31□□□□□ -1.88
PTPRK-209ENST00000415046 PRNDQ9UKY0 176 aa3.31□□□□□ -1.88
PTPRK-209ENST00000415046 PPP5D1E7EU14 171 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 G3V4G9 280 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 SCGB2A1O75556 95 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 UPK1BO75841 260 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 NDUFB6O95139 128 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 IFNA17P01571 189 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 TRBV12-3P01733 135 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 HLA-AP01891 365 aaKnown RBP3.3□□□□□ -1.88
PTPRK-209ENST00000415046 PRB2P02812 416 aaPredicted RBP3.3□□□□□ -1.88
PTPRK-209ENST00000415046 LGALS1P09382 135 aaKnown RBP3.3□□□□□ -1.88
PTPRK-209ENST00000415046 P0C879 139 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 ANXA3P12429 323 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 DEFA4P12838 97 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 IGLL1P15814 213 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 PSMB6P28072 239 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 UBE2MP61081 183 aaKnown RBP3.3□□□□□ -1.88
PTPRK-209ENST00000415046 ATP5G2Q06055 141 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 WT1-ASQ06250 92 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 ZNF616Q08AN1 781 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 KIAA0141Q14154 515 aaPredicted RBP3.3□□□□□ -1.88
PTPRK-209ENST00000415046 ANKRD55Q3KP44 614 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 SLC25A24Q6NUK1 477 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 KRTAP5-2Q701N4 177 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 LYZL2Q7Z4W2 148 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 TTC9CQ8N5M4 171 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 LRTM2Q8N967 370 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 OR11H1Q8NG94 326 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 OR52B4Q8NGK2 314 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 OR1N2Q8NGR9 330 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 OR1S1Q8NH92 325 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 ENKURQ8TC29 256 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 MYOZ3Q8TDC0 251 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 PHLDA1Q8WV24 401 aaPredicted RBP3.3□□□□□ -1.88
PTPRK-209ENST00000415046 LSM10Q969L4 123 aaKnown RBP3.3□□□□□ -1.88
PTPRK-209ENST00000415046 GPR146Q96CH1 333 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 UBE2E2Q96LR5 201 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 TMEM56Q96MV1 263 aa3.3□□□□□ -1.88
PTPRK-209ENST00000415046 P2RX4Q99571 388 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms