RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 Q6ZVH6 145 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 MSGN1A6NI15 193 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 F5H768 121 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 F8VVB4 439 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 F8VWA3 439 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 K7EP13 123 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 SPAG11BQ08648 103 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 COLCA1Q6ZS62 124 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 NPWQ8N729 165 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 DIP2AQ14689 1571 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 SLIT1O75093 1534 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-202ENST00000411767 MBD3L4A6NDZ8 208 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-202ENST00000411767 MBD3L3A6NE82 208 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-202ENST00000411767 MBD3L5A6NJ08 208 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-202ENST00000411767 CRYGBP07316 175 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 ZNF708P17019 499 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 Q6ZVQ6 151 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 FAM231DQ6ZW35 169 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 MBD3L2Q8NHZ7 208 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-202ENST00000411767 IL17DQ8TAD2 202 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 MLST8Q9BVC4 326 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV4OR15-8A0A075B7B6 117 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 A0A087WW49 117 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 PRB1P04280 392 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 CDCP2Q5VXM1 449 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 LCN12Q6JVE5 192 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 PPP1R3EQ9H7J1 279 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 IL17CQ9P0M4 197 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 FER1L4A9Z1Z3 1794 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 HMGN4O00479 90 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 TIMM17BO60830 172 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 CD59P13987 128 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 LGALS9BQ3B8N2 356 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 STPG1Q5TH74 334 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 LGALS9CQ6DKI2 356 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 KLK13Q9UKR3 277 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 BCL9O00512 1426 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV1-45A0A0A0MS14 117 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 M0QXV9 152 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 IGF2P01344 180 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 C9orf139Q6ZV77 190 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 SLC25A45Q8N413 288 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 WBP1Q96G27 269 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 PSG8Q9UQ74 426 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 LRRC7Q96NW7 1537 aa3.79□□□□□ -1.8
PTPN13-202ENST00000411767 NPYP01303 97 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 TMEM14BQ9NUH8 114 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 TEX49A0A1B0GTD5 131 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 J3QQQ9 107 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 NOVP48745 357 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 PDCD1Q15116 288 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 METRNLQ641Q3 311 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 BMPERQ8N8U9 685 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 ZNF706Q9Y5V0 76 aaPredicted RBP3.78□□□□□ -1.8
PTPN13-202ENST00000411767 NDUFA4O00483 81 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 SIVA1O15304 175 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 SOCS1O15524 211 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 CD300LDQ6UXZ3 194 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 SDIM1Q6ZPB5 146 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 SCRT1Q9BWW7 348 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 LIME1Q9H400 295 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 CITO14578 2027 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 VSIG8P0DPA2 414 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 C8orf86Q6ZUL3 223 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 RNF152Q8N8N0 203 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 CCL13Q99616 98 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 C12orf77C9JDV5 145 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 C12orf74Q32Q52 190 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 NMSQ5H8A3 153 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 COX7B2Q8TF08 81 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 A0A087X0K7 114 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 IGHV3-20A0A0C4DH32 117 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 A0A1W2PPM0 123 aa3.78□□□□□ -1.8
PTPN13-202ENST00000411767 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.78□□□□□ -1.8
PTPN13-202ENST00000411767 COX20Q5RI15 118 aa3.78□□□□□ -1.81
PTPN13-202ENST00000411767 C9orf85Q96MD7 179 aa3.78□□□□□ -1.81
PTPN13-202ENST00000411767 FAM60AQ9NP50 221 aa3.78□□□□□ -1.81
PTPN13-202ENST00000411767 CARHSP1Q9Y2V2 147 aaKnown RBP3.78□□□□□ -1.81
PTPN13-202ENST00000411767 XRN1Q8IZH2 1706 aaKnown RBP3.78□□□□□ -1.81
PTPN13-202ENST00000411767 MEGF6O75095 1541 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-66A0A0C4DH42 116 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 TMEM133Q9H2Q1 129 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV1OR21-1A0A087WYE8 117 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV2OR16-5A0A0B4J2B6 119 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 MUC21A0A0G2JKD1 596 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 MUC21A0A140T8X8 626 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 A0A1W2PR77 199 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 DMRTC2Q8IXT2 367 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-202ENST00000411767 FAM168AQ92567 244 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 PTH2Q96A98 100 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 CCDC140Q96MF4 163 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 NRTNQ99748 197 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 RGPD1P0DJD0 1748 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 IGKV2D-24A0A075B6R9 120 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 M0R1W7 72 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 ZG16O60844 167 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 CGAP01215 116 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 CD55P08174 381 aa3.77□□□□□ -1.81
PTPN13-202ENST00000411767 MINOS1Q5TGZ0 78 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms