RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 LYRM2Q9NU23 88 aaPredicted RBP16.76■□□□□ 0.27
PTCD3-203ENST00000409783 MGAT4CQ9UBM8 478 aa16.76■□□□□ 0.27
PTCD3-203ENST00000409783 FNDC10F2Z333 226 aa16.75■□□□□ 0.27
PTCD3-203ENST00000409783 H0YIZ8 118 aa16.75■□□□□ 0.27
PTCD3-203ENST00000409783 DEDDO75618 318 aa16.75■□□□□ 0.27
PTCD3-203ENST00000409783 PVALBP20472 110 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-203ENST00000409783 RRAS2P62070 204 aaPredicted RBP16.75■□□□□ 0.27
PTCD3-203ENST00000409783 CYCSP99999 105 aaKnown RBP16.75■□□□□ 0.27
PTCD3-203ENST00000409783 OR51G1Q8NGK1 321 aa16.75■□□□□ 0.27
PTCD3-203ENST00000409783 IGHV3-66A0A0C4DH42 116 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 IGSF23A1L1A6 192 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 BCAP31P51572 246 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 CAV2P51636 162 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 CD81P60033 236 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 AKR1C1Q04828 323 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 LAMTOR1Q6IAA8 161 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 TMEM182Q6ZP80 229 aaPredicted RBP16.74■□□□□ 0.27
PTCD3-203ENST00000409783 GTSCR1Q86UQ5 136 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 RNF125Q96EQ8 232 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 SPAG8Q99932 426 aaPredicted RBP16.74■□□□□ 0.27
PTCD3-203ENST00000409783 NEURL2Q9BR09 285 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 C19orf73Q9NVV2 129 aa16.74■□□□□ 0.27
PTCD3-203ENST00000409783 A8MZ25 164 aa16.73■□□□□ 0.27
PTCD3-203ENST00000409783 HNRNPCP07910 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
PTCD3-203ENST00000409783 CXCL3P19876 107 aa16.73■□□□□ 0.27
PTCD3-203ENST00000409783 OR2F1Q13607 317 aa16.73■□□□□ 0.27
PTCD3-203ENST00000409783 TMEM252Q8N6L7 170 aa16.73■□□□□ 0.27
PTCD3-203ENST00000409783 B9D2Q9BPU9 175 aa16.73■□□□□ 0.27
PTCD3-203ENST00000409783 GGACTQ9BVM4 153 aa16.73■□□□□ 0.27
PTCD3-203ENST00000409783 OR5AC2Q9NZP5 309 aa16.73■□□□□ 0.27
PTCD3-203ENST00000409783 SMCO3A2RU48 225 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 DFFBO76075 338 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 CST7O76096 145 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 FABP1P07148 127 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 IGHV4-30-4P0DP06 118 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 BMI1P35226 326 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 TCF24Q7RTU0 167 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 PPP1R1CQ8WVI7 109 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 NPVFQ9HCQ7 196 aa16.72■□□□□ 0.27
PTCD3-203ENST00000409783 A0A1W2PS18 150 aa16.71■□□□□ 0.27
PTCD3-203ENST00000409783 LRRC37A5PQ49AS3 106 aa16.71■□□□□ 0.27
PTCD3-203ENST00000409783 STPG3Q8N7X2 389 aa16.71■□□□□ 0.27
PTCD3-203ENST00000409783 RNF126Q9BV68 326 aa16.71■□□□□ 0.27
PTCD3-203ENST00000409783 WFDC10AQ9H1F0 79 aa16.71■□□□□ 0.27
PTCD3-203ENST00000409783 CD5P06127 495 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 GATA2P23769 480 aaPredicted RBP16.7■□□□□ 0.26
PTCD3-203ENST00000409783 P2RY1P47900 373 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 SULT1A1P50225 295 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 SLC38A11Q08AI6 406 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 FCN2Q15485 313 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 C16orf54Q6UWD8 224 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 OR11H7Q8NGC8 314 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 TMEM231Q9H6L2 316 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 RABAC1Q9UI14 185 aa16.7■□□□□ 0.26
PTCD3-203ENST00000409783 E5RGE8 158 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 BUB3O43684 328 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 MPC2O95563 127 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 RLN2P04090 185 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 FRMD6-AS1P0C7T7 363 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 EIF2B2P49770 351 aaKnown RBP16.69■□□□□ 0.26
PTCD3-203ENST00000409783 CYP2G1PQ6ZSU1 146 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 TMEM217Q8N7C4 229 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 GLMPQ8WWB7 406 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 PBDC1Q9BVG4 233 aa16.69■□□□□ 0.26
PTCD3-203ENST00000409783 CFDP00746 253 aaPredicted RBP16.68■□□□□ 0.26
PTCD3-203ENST00000409783 LYZP61626 148 aa16.68■□□□□ 0.26
PTCD3-203ENST00000409783 VWC2Q2TAL6 325 aa16.68■□□□□ 0.26
PTCD3-203ENST00000409783 DEFB125Q8N687 156 aa16.68■□□□□ 0.26
PTCD3-203ENST00000409783 NARS2Q96I59 477 aaKnown RBP16.68■□□□□ 0.26
PTCD3-203ENST00000409783 MED28Q9H204 178 aa16.68■□□□□ 0.26
PTCD3-203ENST00000409783 COL7A1Q02388 2944 aa16.68■□□□□ 0.26
PTCD3-203ENST00000409783 IGKV3-7A0A075B6H7 116 aa16.67■□□□□ 0.26
PTCD3-203ENST00000409783 OR4C46A6NHA9 309 aa16.67■□□□□ 0.26
PTCD3-203ENST00000409783 OR11H12B2RN74 326 aa16.67■□□□□ 0.26
PTCD3-203ENST00000409783 ODF3L2Q3SX64 289 aa16.67■□□□□ 0.26
PTCD3-203ENST00000409783 TEPPQ6URK8 271 aa16.67■□□□□ 0.26
PTCD3-203ENST00000409783 BPIFCQ8NFQ6 507 aa16.67■□□□□ 0.26
PTCD3-203ENST00000409783 GRAMD2BQ96HH9 432 aa16.67■□□□□ 0.26
PTCD3-203ENST00000409783 MS4A6AQ9H2W1 248 aa16.67■□□□□ 0.26
PTCD3-203ENST00000409783 S100A11P31949 105 aa16.66■□□□□ 0.26
PTCD3-203ENST00000409783 EWSR1Q01844 656 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTCD3-203ENST00000409783 NHLH2Q02577 135 aa16.66■□□□□ 0.26
PTCD3-203ENST00000409783 LINC00322Q6ZN03 302 aaPredicted RBP16.66■□□□□ 0.26
PTCD3-203ENST00000409783 STX12Q86Y82 276 aa16.66■□□□□ 0.26
PTCD3-203ENST00000409783 GBGT1Q8N5D6 347 aa16.66■□□□□ 0.26
PTCD3-203ENST00000409783 PLP1P60201 277 aa16.65■□□□□ 0.26
PTCD3-203ENST00000409783 SELENOTP62341 195 aa16.65■□□□□ 0.26
PTCD3-203ENST00000409783 SBSPONQ8IVN8 264 aa16.65■□□□□ 0.26
PTCD3-203ENST00000409783 CITED4Q96RK1 184 aa16.65■□□□□ 0.26
PTCD3-203ENST00000409783 MGST2Q99735 147 aa16.65■□□□□ 0.26
PTCD3-203ENST00000409783 FAM110AQ9BQ89 295 aa16.65■□□□□ 0.26
PTCD3-203ENST00000409783 UQCC1Q9NVA1 299 aa16.65■□□□□ 0.26
PTCD3-203ENST00000409783 SLC45A2Q9UMX9 530 aa16.65■□□□□ 0.26
PTCD3-203ENST00000409783 TRAV2A0A0B4J234 112 aa16.64■□□□□ 0.25
PTCD3-203ENST00000409783 AGPAT2O15120 278 aa16.64■□□□□ 0.25
PTCD3-203ENST00000409783 LYL1P12980 280 aa16.64■□□□□ 0.25
PTCD3-203ENST00000409783 TFPI2P48307 235 aa16.64■□□□□ 0.25
PTCD3-203ENST00000409783 TMEM147Q9BVK8 224 aa16.64■□□□□ 0.25
PTCD3-203ENST00000409783 SLC25A31Q9H0C2 315 aa16.64■□□□□ 0.25
PTCD3-203ENST00000409783 UBQLN2Q9UHD9 624 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms