RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PRSS3P35030 304 aa11.63□□□□□ -0.55
CHMP3-203ENST00000409225 SPATA31B1PQ5VZV4 182 aa11.63□□□□□ -0.55
CHMP3-203ENST00000409225 RNF141Q8WVD5 230 aa11.63□□□□□ -0.55
CHMP3-203ENST00000409225 NPIPB3Q92617 1050 aa11.63□□□□□ -0.55
CHMP3-203ENST00000409225 TP53RKQ96S44 253 aa11.63□□□□□ -0.55
CHMP3-203ENST00000409225 PBDC1Q9BVG4 233 aa11.63□□□□□ -0.55
CHMP3-203ENST00000409225 A0A0G2JRQ6 117 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 A0A0J9YX75 114 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 ATG12O94817 140 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 NXPH3O95157 252 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 PI3P19957 117 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 BTF3P20290 206 aaKnown RBP11.62□□□□□ -0.55
CHMP3-203ENST00000409225 HTR2BP41595 481 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 PAX9P55771 341 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 FCN2Q15485 313 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 TTC32Q5I0X7 151 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 UBE2NLQ5JXB2 153 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 Q5VSD8 79 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
CHMP3-203ENST00000409225 GPR146Q96CH1 333 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 ACY3Q96HD9 319 aa11.62□□□□□ -0.55
CHMP3-203ENST00000409225 SOCS3O14543 225 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 PSG1P11464 419 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 GABARAPL2P60520 117 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 RND3P61587 244 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 TRIM16LQ309B1 348 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 SPARTQ8N0X7 666 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 LYPD1Q8N2G4 141 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 RNF125Q96EQ8 232 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 RRNAD1Q96FB5 475 aaKnown RBP11.61□□□□□ -0.55
CHMP3-203ENST00000409225 IGF2BP2-AS1Q96M15 143 aa11.61□□□□□ -0.55
CHMP3-203ENST00000409225 HEYLQ9NQ87 328 aaPredicted RBP11.61□□□□□ -0.55
CHMP3-203ENST00000409225 ATP5G1P05496 136 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 FUSP35637 526 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHMP3-203ENST00000409225 NUP62P37198 522 aaPredicted RBP11.6□□□□□ -0.55
CHMP3-203ENST00000409225 ATP5G3P48201 142 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 PIGPP57054 158 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 SPCS3P61009 180 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 C2orf83Q53S99 150 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 SAMD12Q8N8I0 201 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 OR4C16Q8NGL9 310 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 RNASEH2CQ8TDP1 164 aaKnown RBP11.6□□□□□ -0.55
CHMP3-203ENST00000409225 FCGR1BQ92637 280 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 Q9H3A6 140 aa11.6□□□□□ -0.55
CHMP3-203ENST00000409225 SP6Q3SY56 376 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 ETFRF1Q6IPR1 90 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 SLC24A4Q8NFF2 622 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 GPX8Q8TED1 209 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 FRZBQ92765 325 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 UHRF2Q96PU4 802 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 ABHD1Q96SE0 405 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 DOK5Q9P104 306 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 PFDN2Q9UHV9 154 aa11.59□□□□□ -0.55
CHMP3-203ENST00000409225 FLG2Q5D862 2391 aaPredicted RBP11.59□□□□□ -0.55
CHMP3-203ENST00000409225 C3orf85A0A1B0GTC6 90 aa11.58□□□□□ -0.56
CHMP3-203ENST00000409225 ISLRO14498 428 aa11.58□□□□□ -0.56
CHMP3-203ENST00000409225 RCVRNP35243 200 aa11.58□□□□□ -0.56
CHMP3-203ENST00000409225 XGP55808 180 aa11.58□□□□□ -0.56
CHMP3-203ENST00000409225 AMTNQ6UX39 209 aa11.58□□□□□ -0.56
CHMP3-203ENST00000409225 TMEM170AQ8WVE7 144 aa11.58□□□□□ -0.56
CHMP3-203ENST00000409225 C20orf173Q96LM9 149 aa11.58□□□□□ -0.56
CHMP3-203ENST00000409225 RPRMQ9NS64 109 aa11.58□□□□□ -0.56
CHMP3-203ENST00000409225 CBY3A6NI87 242 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 INSP01308 110 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 ELK1P19419 428 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 AZU1P20160 251 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 SUPT4H1P63272 117 aaKnown RBP11.57□□□□□ -0.56
CHMP3-203ENST00000409225 SPINK13Q1W4C9 94 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 OR8G2PQ6IF36 304 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 IZUMO2Q6UXV1 221 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 OR52E5Q8NH55 327 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 ZNF486Q96H40 463 aaPredicted RBP11.57□□□□□ -0.56
CHMP3-203ENST00000409225 C18orf15Q96N68 181 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 ZNF586Q9NXT0 402 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 PTTG2Q9NZH5 202 aa11.57□□□□□ -0.56
CHMP3-203ENST00000409225 PLAC8L1A1L4L8 177 aa11.56□□□□□ -0.56
CHMP3-203ENST00000409225 CEBPZOSA8MTT3 80 aa11.56□□□□□ -0.56
CHMP3-203ENST00000409225 ANKRD65E5RJM6 399 aa11.56□□□□□ -0.56
CHMP3-203ENST00000409225 M0R2Z0 102 aa11.56□□□□□ -0.56
CHMP3-203ENST00000409225 TMEM127O75204 238 aa11.56□□□□□ -0.56
CHMP3-203ENST00000409225 C16orf92Q96LL3 132 aa11.56□□□□□ -0.56
CHMP3-203ENST00000409225 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.56□□□□□ -0.56
CHMP3-203ENST00000409225 A0A1W2PPQ1 181 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 A8MTW9 85 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 CRXO43186 299 aaPredicted RBP11.55□□□□□ -0.56
CHMP3-203ENST00000409225 TSPOP30536 169 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 TGFBR1P36897 503 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 LYZP61626 148 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 AARDQ4LEZ3 155 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 SNX29P2Q8IUI4 249 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 BAP18Q8IXM2 172 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 OR11H7Q8NGC8 314 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 PPP1R14BQ96C90 147 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 MDFICQ9P1T7 246 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 COPZ2Q9P299 210 aa11.55□□□□□ -0.56
CHMP3-203ENST00000409225 UCP1P25874 307 aa11.54□□□□□ -0.56
CHMP3-203ENST00000409225 ZNF90Q03938 601 aa11.54□□□□□ -0.56
CHMP3-203ENST00000409225 C1orf194Q5T5A4 169 aa11.54□□□□□ -0.56
CHMP3-203ENST00000409225 CROCCP3Q8IVE0 287 aa11.54□□□□□ -0.56
CHMP3-203ENST00000409225 OR8I2Q8N0Y5 310 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms