RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 MRPL54Q6P161 138 aaKnown RBP13.41□□□□□ -0.26
NUP50-203ENST00000407019 LHFPL4Q7Z7J7 247 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 SRSF8Q9BRL6 282 aaKnown RBP13.41□□□□□ -0.26
NUP50-203ENST00000407019 DCHS1Q96JQ0 3298 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 PGPA6NDG6 321 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
NUP50-203ENST00000407019 HLA-DQA1P01909 254 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 GP9P14770 177 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 HTR1DP28221 377 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 UNQ6494/PRO21346Q6UXR6 183 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 GSX1Q9H4S2 264 aaPredicted RBP13.41□□□□□ -0.26
NUP50-203ENST00000407019 CBLN4Q9NTU7 201 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 MALRD1Q5VYJ5 2156 aa13.41□□□□□ -0.26
NUP50-203ENST00000407019 MMDQ15546 238 aa13.4□□□□□ -0.26
NUP50-203ENST00000407019 LDLRAD2Q5SZI1 272 aa13.4□□□□□ -0.26
NUP50-203ENST00000407019 OR11H6Q8NGC7 330 aa13.4□□□□□ -0.26
NUP50-203ENST00000407019 MBD6Q96DN6 1003 aa13.4□□□□□ -0.26
NUP50-203ENST00000407019 GRAMD2BQ96HH9 432 aa13.4□□□□□ -0.26
NUP50-203ENST00000407019 SSBP3Q9BWW4 388 aaPredicted RBP13.4□□□□□ -0.26
NUP50-203ENST00000407019 NAGKQ9UJ70 344 aa13.4□□□□□ -0.26
NUP50-203ENST00000407019 HIGD1AQ9Y241 93 aa13.4□□□□□ -0.26
NUP50-203ENST00000407019 A8MWP6 167 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 I3L2K1 104 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 CNIH1O95406 144 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 IGLC1P0CG04 106 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 ARF6P62330 175 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 FAM168AQ92567 244 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 CHRDL1Q9BU40 450 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 WNT10AQ9GZT5 417 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 DPM3Q9P2X0 92 aa13.4□□□□□ -0.27
NUP50-203ENST00000407019 F2Z2F3 143 aa13.39□□□□□ -0.27
NUP50-203ENST00000407019 LYZP61626 148 aa13.39□□□□□ -0.27
NUP50-203ENST00000407019 USF2Q15853 346 aaPredicted RBP13.39□□□□□ -0.27
NUP50-203ENST00000407019 NUDT10Q8NFP7 164 aa13.39□□□□□ -0.27
NUP50-203ENST00000407019 SMIM12Q96EX1 92 aa13.39□□□□□ -0.27
NUP50-203ENST00000407019 NUDT11Q96G61 164 aa13.39□□□□□ -0.27
NUP50-203ENST00000407019 GNB4Q9HAV0 340 aa13.39□□□□□ -0.27
NUP50-203ENST00000407019 KLF12Q9Y4X4 402 aa13.39□□□□□ -0.27
NUP50-203ENST00000407019 PLXNB1O43157 2135 aa13.39□□□□□ -0.27
NUP50-203ENST00000407019 PSG1P11464 419 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 CEACAM3P40198 252 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 OR10J3Q5JRS4 329 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 ASPHD1Q5U4P2 390 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 LEMD1Q68G75 181 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 C11orf71Q6IPW1 123 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 PRR27Q6MZM9 219 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 C5orf17Q8NAS9 161 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 NEU4Q8WWR8 484 aaPredicted RBP13.38□□□□□ -0.27
NUP50-203ENST00000407019 RASL11BQ9BPW5 248 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 ATG101Q9BSB4 218 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 COL25A1Q9BXS0 654 aaPredicted RBP13.38□□□□□ -0.27
NUP50-203ENST00000407019 C7orf69Q9H7B7 122 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 ZNF331Q9NQX6 463 aaPredicted RBP13.38□□□□□ -0.27
NUP50-203ENST00000407019 RPH3ALQ9UNE2 315 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 TLN1Q9Y490 2541 aaKnown RBP13.38□□□□□ -0.27
NUP50-203ENST00000407019 M0R1W7 72 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 NBR2O15453 112 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 HIST1H1EP10412 219 aaKnown RBP13.38□□□□□ -0.27
NUP50-203ENST00000407019 RASL11AQ6T310 242 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 HILPDAQ9Y5L2 63 aa13.38□□□□□ -0.27
NUP50-203ENST00000407019 LOC105371242A0A075B767 164 aa13.37□□□□□ -0.27
NUP50-203ENST00000407019 KIAA1644Q3SXP7 199 aa13.37□□□□□ -0.27
NUP50-203ENST00000407019 Q6ZWC4 215 aa13.37□□□□□ -0.27
NUP50-203ENST00000407019 WIPF2Q8TF74 440 aaPredicted RBP13.37□□□□□ -0.27
NUP50-203ENST00000407019 CFHR4Q92496 578 aa13.37□□□□□ -0.27
NUP50-203ENST00000407019 GPR82Q96P67 336 aa13.37□□□□□ -0.27
NUP50-203ENST00000407019 SAMD10Q9BYL1 202 aa13.37□□□□□ -0.27
NUP50-203ENST00000407019 Q9H3A6 140 aa13.37□□□□□ -0.27
NUP50-203ENST00000407019 CEP295Q9C0D2 2601 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 BMPR1BO00238 502 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 KLRD1Q13241 179 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 ZNF600Q6ZNG1 722 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 FMC1Q96HJ9 113 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 HSPB9Q9BQS6 159 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 H3BTX0 84 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 TOMM40O96008 361 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 APCSP02743 223 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 SGK494Q96LW2 274 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 SLC25A39Q9BZJ4 359 aaPredicted RBP13.36□□□□□ -0.27
NUP50-203ENST00000407019 TMEM14CQ9P0S9 112 aa13.36□□□□□ -0.27
NUP50-203ENST00000407019 POLR3KQ9Y2Y1 108 aaPredicted RBP13.36□□□□□ -0.27
NUP50-203ENST00000407019 ZNF705FA8MVS1 300 aaPredicted RBP13.35□□□□□ -0.27
NUP50-203ENST00000407019 ODF3BA8MYP8 253 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 NDUFA3O95167 84 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 TCRAP04437 139 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 ZNF705DP0CH99 300 aaPredicted RBP13.35□□□□□ -0.27
NUP50-203ENST00000407019 ZNF705BP0CI00 300 aaPredicted RBP13.35□□□□□ -0.27
NUP50-203ENST00000407019 PRTN3P24158 256 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 BRS3P32247 399 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 NUP35Q8NFH5 326 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 NPBQ8NG41 125 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 TSKUQ8WUA8 353 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 NDUFAF3Q9BU61 184 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 K7EIM0 57 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 SRIP30626 198 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 TMEM68Q96MH6 324 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 TBX15Q96SF7 602 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 OTORQ9NRC9 128 aa13.35□□□□□ -0.27
NUP50-203ENST00000407019 ZNF253O75346 499 aa13.34□□□□□ -0.27
NUP50-203ENST00000407019 LTAP01374 205 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms