RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 GGTLC3B5MD39 225 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 ISLRO14498 428 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 MT-ATP8P03928 68 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 FABP4P15090 132 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 INSL3P51460 131 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 RPS24P62847 133 aaKnown RBP2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 HLA-DRB3P79483 266 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 MYL5Q02045 173 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 AMMECR1LQ6DCA0 310 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 LCN8Q6JVE9 175 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 SLC25A34Q6PIV7 304 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 C16orf47Q6ZP98 133 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 Q6ZRU5 148 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 TCF23Q7RTU1 214 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 VN1R4Q7Z5H5 301 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 C20orf196Q8IYI0 205 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 C3orf22Q8N5N4 141 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 ANKRD29Q8N6D5 301 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR4C16Q8NGL9 310 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR8S1Q8NH09 359 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 ERMAPQ96PL5 475 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 PBOV1Q9GZY1 135 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 NPVFQ9HCQ7 196 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 OTORQ9NRC9 128 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 COQ4Q9Y3A0 265 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 LINC00312Q9Y6C7 94 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 NUP205Q92621 2012 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 QRICH2Q9H0J4 1663 aa2.84□□□□□ -1.95
HMGB1P13-201ENST00000406019 NSD3Q9BZ95 1437 aa2.84□□□□□ -1.96
HMGB1P13-201ENST00000406019 MADDQ8WXG6 1647 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGHV3OR16-8A0A075B7F1 116 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGHV1-45A0A0A0MS14 117 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 TRAV40A0A0B4J280 105 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 A0A0D9SG52 128 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGHV1-69-2A0A0G2JMI3 117 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 KNCNA6PVL3 124 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 H3BQ15 152 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 DPM2O94777 84 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 ADCYAP1P18509 176 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 CCR2P41597 374 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF140P52738 457 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 TMBIM6P55061 237 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 MP68P56378 58 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 LINC00315P59091 139 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 TPPP2P59282 170 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 FABP5Q01469 135 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 IQCJQ1A5X6 159 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 LCN15Q6UWW0 184 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 ATP5L2Q7Z4Y8 100 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 SLC22A24Q8N4F4 322 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF709Q8N972 641 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR5D14Q8NGL3 314 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR4A5Q8NH83 315 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 SLC25A40Q8TBP6 338 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 CIB3Q96Q77 187 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 GINS4Q9BRT9 223 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 VAMP8Q9BV40 100 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 ATG5Q9H1Y0 275 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 CXorf21Q9HAI6 301 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 PCTPQ9UKL6 214 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 WASHC3Q9Y3C0 194 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 PXMP4Q9Y6I8 212 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 SBF1O95248 1867 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 COL1A2P08123 1366 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 ABCC5O15440 1437 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 NEO1Q92859 1461 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 LRRC7Q96NW7 1537 aa2.83□□□□□ -1.96
HMGB1P13-201ENST00000406019 PREX2Q70Z35 1606 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 THADAQ6YHU6 1953 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGKV2-28A0A075B6P5 120 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 TRGV10A0A0A0MS01 117 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 A0A0J9YW62 118 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 A0A1B0GV50 99 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR4C45A6NMZ5 311 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGLL5B9A064 214 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 CDC42EP2O14613 210 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 TAX1BP3O14907 124 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGKV2D-28P01615 120 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 HLA-DRB1P01911 266 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 RPS4Y1P22090 263 aaKnown RBP2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 INPP1P49441 399 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 FOXA3P55318 350 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 FKBP1AP62942 108 aaKnown RBP2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 HERVK_113P63121 156 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 LYRM7Q5U5X0 104 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 LRP11Q86VZ4 500 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF431Q8TF32 576 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 TSLPQ969D9 159 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 MAL2Q969L2 176 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 BORCS8Q96FH0 119 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 AP1S3Q96PC3 154 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 S100A13Q99584 98 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 PKMYT1Q99640 499 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF471Q9BX82 626 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 TAS2R8Q9NYW2 309 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 ANAPC10Q9UM13 185 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 FUT9Q9Y231 359 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 IER3IP1Q9Y5U9 82 aa2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 KDM6AO15550 1401 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 N4BP2Q86UW6 1770 aaPredicted RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms