RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 F2Z2F3 143 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 LIPFP07098 398 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 GP9P14770 177 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 DLX1P56177 255 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 BLNKQ8WV28 456 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 SRSF12Q8WXF0 261 aaKnown RBP18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 FAM168AQ92567 244 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 FBXL15Q9H469 300 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 BMPR1BO00238 502 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 GNG5P63218 68 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 C5orf17Q8NAS9 161 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 LY6G5BQ8NDX9 201 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 ATG101Q9BSB4 218 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 C7orf69Q9H7B7 122 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 HIGD1AQ9Y241 93 aa18.42■□□□□ 0.54
RABGGTA-202ENST00000399409 GPR82Q96P67 336 aa18.41■□□□□ 0.54
RABGGTA-202ENST00000399409 SSBP3Q9BWW4 388 aaPredicted RBP18.41■□□□□ 0.54
RABGGTA-202ENST00000399409 CA1P00915 261 aaPredicted RBP18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 GPX1P07203 203 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 APELAP0DMC3 54 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 C19orf35Q6ZS72 473 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 TSKUQ8WUA8 353 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 TMEM190Q8WZ59 177 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 FMC1Q96HJ9 113 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 KCNS1Q96KK3 526 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 SIAH2O43255 324 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 KIAA1644Q3SXP7 199 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 TOMM20LQ6UXN7 152 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 TEX43Q6ZNM6 134 aa18.4■□□□□ 0.54
RABGGTA-202ENST00000399409 ZNF253O75346 499 aa18.39■□□□□ 0.54
RABGGTA-202ENST00000399409 TOMM40O96008 361 aa18.39■□□□□ 0.54
RABGGTA-202ENST00000399409 SRIP30626 198 aa18.39■□□□□ 0.54
RABGGTA-202ENST00000399409 PLGLAQ15195 96 aa18.39■□□□□ 0.54
RABGGTA-202ENST00000399409 TPTE2P1Q5T6R2 138 aa18.39■□□□□ 0.54
RABGGTA-202ENST00000399409 ZNF586Q9NXT0 402 aa18.39■□□□□ 0.54
RABGGTA-202ENST00000399409 TMEM14CQ9P0S9 112 aa18.39■□□□□ 0.54
RABGGTA-202ENST00000399409 ONECUT1Q9UBC0 465 aa18.39■□□□□ 0.54
RABGGTA-202ENST00000399409 IGHV3-21A0A0B4J1V1 117 aa18.39■□□□□ 0.53
RABGGTA-202ENST00000399409 I3L2K1 104 aa18.39■□□□□ 0.53
RABGGTA-202ENST00000399409 IGLC1P0CG04 106 aa18.39■□□□□ 0.53
RABGGTA-202ENST00000399409 PRB3Q04118 309 aaPredicted RBP18.39■□□□□ 0.53
RABGGTA-202ENST00000399409 NUP35Q8NFH5 326 aa18.39■□□□□ 0.53
RABGGTA-202ENST00000399409 RAB1BQ9H0U4 201 aa18.39■□□□□ 0.53
RABGGTA-202ENST00000399409 CCL21O00585 134 aa18.38■□□□□ 0.53
RABGGTA-202ENST00000399409 RBM14Q96PK6 669 aaKnown RBP18.38■□□□□ 0.53
RABGGTA-202ENST00000399409 PRR27Q6MZM9 219 aa18.38■□□□□ 0.53
RABGGTA-202ENST00000399409 ATP5L2Q7Z4Y8 100 aa18.38■□□□□ 0.53
RABGGTA-202ENST00000399409 TMEM68Q96MH6 324 aa18.38■□□□□ 0.53
RABGGTA-202ENST00000399409 MLST8Q9BVC4 326 aa18.38■□□□□ 0.53
RABGGTA-202ENST00000399409 Q9H3A6 140 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 A0A1B0GV90 55 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 PSG1P11464 419 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 GRNP28799 593 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 OR11H6Q8NGC7 330 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 TIMD4Q96H15 378 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 C20orf144Q9BQM9 153 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 OTORQ9NRC9 128 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 MRPL27Q9P0M9 148 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 ZNF492Q9P255 531 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 MSRB2Q9Y3D2 182 aa18.37■□□□□ 0.53
RABGGTA-202ENST00000399409 A0A1W2PS18 150 aa18.36■□□□□ 0.53
RABGGTA-202ENST00000399409 SNRPCP09234 159 aaKnown RBP18.36■□□□□ 0.53
RABGGTA-202ENST00000399409 HTR1DP28221 377 aa18.36■□□□□ 0.53
RABGGTA-202ENST00000399409 UCNP55089 124 aa18.36■□□□□ 0.53
RABGGTA-202ENST00000399409 CT83Q5H943 113 aa18.36■□□□□ 0.53
RABGGTA-202ENST00000399409 RASL11BQ9BPW5 248 aa18.36■□□□□ 0.53
RABGGTA-202ENST00000399409 WNT10AQ9GZT5 417 aa18.36■□□□□ 0.53
RABGGTA-202ENST00000399409 MALRD1Q5VYJ5 2156 aa18.36■□□□□ 0.53
RABGGTA-202ENST00000399409 TIMM23O14925 209 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 CNIH1O95406 144 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 LTAP01374 205 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 TCRAP04437 139 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 LYZP61626 148 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 ZNF600Q6ZNG1 722 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 DPM3Q9P2X0 92 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 CD33P20138 364 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 CEACAM3P40198 252 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 NEU1Q99519 415 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 GSX1Q9H4S2 264 aaPredicted RBP18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 TBL2Q9Y4P3 447 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 MUC6Q6W4X9 2439 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 PLXNB1O43157 2135 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 POLEQ07864 2286 aa18.35■□□□□ 0.53
RABGGTA-202ENST00000399409 CDKN1AP38936 164 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 AMTP48728 403 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 SLAQ13239 276 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 SLC25A39Q9BZJ4 359 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 RPP21Q9H633 154 aaKnown RBP18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 RPH3ALQ9UNE2 315 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 HIGD1CA8MV81 97 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 ZNF324O75467 553 aaPredicted RBP18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 SSTP61278 116 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 LHFPL4Q7Z7J7 247 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 RCHY1Q96PM5 261 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 NRN1Q9NPD7 142 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 FBXL7Q9UJT9 491 aa18.34■□□□□ 0.53
RABGGTA-202ENST00000399409 M0R1W7 72 aa18.33■□□□□ 0.53
RABGGTA-202ENST00000399409 OR2J3O76001 311 aa18.33■□□□□ 0.53
RABGGTA-202ENST00000399409 MMDQ15546 238 aa18.33■□□□□ 0.53
RABGGTA-202ENST00000399409 FAM103A1Q9BTL3 118 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms