RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 C8orf46Q8TAG6 207 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.34□□□□□ -0.27
ITSN1-209ENST00000399352 A0A1W2PR77 199 aa13.34□□□□□ -0.27
ITSN1-209ENST00000399352 ZCCHC24Q8N2G6 241 aaKnown RBP13.34□□□□□ -0.27
ITSN1-209ENST00000399352 PSG3Q16557 428 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 RHOGP84095 191 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 PHLDA1Q8WV24 401 aaPredicted RBP13.33□□□□□ -0.28
ITSN1-209ENST00000399352 MGST2Q99735 147 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 COX11Q9Y6N1 276 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 UCNP55089 124 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 EP300Q09472 2414 aaPredicted RBP13.33□□□□□ -0.28
ITSN1-209ENST00000399352 TMEM8BA6NDV4 472 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 A8MWP6 167 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 GHRHP01286 108 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 CRPP02741 224 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 SRD5A1P18405 259 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 C5orf24Q7Z6I8 188 aa13.33□□□□□ -0.28
ITSN1-209ENST00000399352 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-209ENST00000399352 C17orf100A8MU93 164 aa13.32□□□□□ -0.28
ITSN1-209ENST00000399352 ADAMTSL3P82987 1691 aa13.32□□□□□ -0.28
ITSN1-209ENST00000399352 PRR19A6NJB7 356 aa13.32□□□□□ -0.28
ITSN1-209ENST00000399352 TMEM167AQ8TBQ9 72 aa13.32□□□□□ -0.28
ITSN1-209ENST00000399352 ZC2HC1BQ5TFG8 222 aa13.32□□□□□ -0.28
ITSN1-209ENST00000399352 RPRMLQ8N4K4 120 aa13.32□□□□□ -0.28
ITSN1-209ENST00000399352 DOCK10Q96BY6 2186 aa13.32□□□□□ -0.28
ITSN1-209ENST00000399352 FGFBP3Q8TAT2 258 aa13.32□□□□□ -0.28
ITSN1-209ENST00000399352 POLR3KQ9Y2Y1 108 aaPredicted RBP13.32□□□□□ -0.28
ITSN1-209ENST00000399352 SPTBN1Q01082 2364 aaKnown RBP13.31□□□□□ -0.28
ITSN1-209ENST00000399352 CD5LO43866 347 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 ZIC4Q8N9L1 334 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 A0A1W2PRX2 142 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 C1orf162Q8NEQ5 155 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-209ENST00000399352 TMEM133Q9H2Q1 129 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 MYOFQ9NZM1 2061 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 A0A1B0GUS0 222 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 IGKV1-5P01602 117 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 MORN3Q6PF18 240 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-209ENST00000399352 CCL19Q99731 98 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 NMSQ5H8A3 153 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 TMEM86BQ8N661 226 aa13.31□□□□□ -0.28
ITSN1-209ENST00000399352 ZNF625Q96I27 306 aaPredicted RBP13.31□□□□□ -0.28
ITSN1-209ENST00000399352 FAM90A2PQ658T7 463 aa13.3□□□□□ -0.28
ITSN1-209ENST00000399352 TRAV8-3A0A0A6YYJ7 113 aa13.3□□□□□ -0.28
ITSN1-209ENST00000399352 CDKN1AP38936 164 aa13.3□□□□□ -0.28
ITSN1-209ENST00000399352 RPL15P61313 204 aaKnown RBP13.3□□□□□ -0.28
ITSN1-209ENST00000399352 SNHG12Q9BXW3 62 aa13.3□□□□□ -0.28
ITSN1-209ENST00000399352 MARF1Q9Y4F3 1742 aaKnown RBP13.3□□□□□ -0.28
ITSN1-209ENST00000399352 LGALS1P09382 135 aaKnown RBP13.3□□□□□ -0.28
ITSN1-209ENST00000399352 FOXF2Q12947 444 aa13.3□□□□□ -0.28
ITSN1-209ENST00000399352 RASL11AQ6T310 242 aa13.3□□□□□ -0.28
ITSN1-209ENST00000399352 CST9LQ9H4G1 147 aa13.3□□□□□ -0.28
ITSN1-209ENST00000399352 TDRD15B5MCY1 1934 aaKnown RBP13.3□□□□□ -0.28
ITSN1-209ENST00000399352 S100A7L2Q5SY68 101 aa13.3□□□□□ -0.28
ITSN1-209ENST00000399352 FAM90A9PA6NNJ1 464 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 SMKR1H3BMG3 65 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 CHAC1Q9BUX1 264 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 TRAV3A0A0B4J244 114 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 C9orf106Q8NAJ2 232 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 IGKV1-27A0A075B6S5 117 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 STPG4Q8N801 248 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 TMEM158Q8WZ71 300 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 MRPL27Q9P0M9 148 aaKnown RBP13.29□□□□□ -0.28
ITSN1-209ENST00000399352 INTS1Q8N201 2190 aaKnown RBP13.29□□□□□ -0.28
ITSN1-209ENST00000399352 ADARB2-AS1A8MUL3 147 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 C9JQL5 133 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 PAX4O43316 350 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 TMEM14EPQ6UXP3 125 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 MRPL52Q86TS9 123 aaKnown RBP13.29□□□□□ -0.28
ITSN1-209ENST00000399352 CHCHD5Q9BSY4 110 aa13.29□□□□□ -0.28
ITSN1-209ENST00000399352 LAMB2P55268 1798 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 IGHV3-73A0A0B4J1V6 119 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 TIMM23O14925 209 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 TOMM40O96008 361 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 ZNF474Q6S9Z5 364 aaPredicted RBP13.28□□□□□ -0.28
ITSN1-209ENST00000399352 ANKRD36A6QL64 1941 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 C9JAW5 83 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 ZNF876PQ49A33 203 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 Q8TAT8 98 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 LINC00527Q9UJ94 153 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 LYNX1G3V0Z9 82 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 NPSP0C0P6 89 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 LYNX1P0DP58 116 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 LINC01559Q495D7 138 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 ASCL4Q6XD76 172 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 RNF144BQ7Z419 303 aa13.28□□□□□ -0.28
ITSN1-209ENST00000399352 TRIOBPQ9H2D6 2365 aa13.27□□□□□ -0.28
ITSN1-209ENST00000399352 RSPO3Q9BXY4 272 aaPredicted RBP13.27□□□□□ -0.28
ITSN1-209ENST00000399352 SLC25A39Q9BZJ4 359 aaPredicted RBP13.27□□□□□ -0.28
ITSN1-209ENST00000399352 C7orf69Q9H7B7 122 aa13.27□□□□□ -0.28
ITSN1-209ENST00000399352 POLEQ07864 2286 aa13.27□□□□□ -0.28
ITSN1-209ENST00000399352 TRGV4A0A0C4DH28 118 aa13.27□□□□□ -0.28
ITSN1-209ENST00000399352 FAM231BA6NCW3 169 aa13.27□□□□□ -0.28
ITSN1-209ENST00000399352 SELLP14151 372 aa13.27□□□□□ -0.28
ITSN1-209ENST00000399352 STHQ8IWL8 128 aa13.27□□□□□ -0.28
ITSN1-209ENST00000399352 MYOD1P15172 320 aa13.27□□□□□ -0.29
ITSN1-209ENST00000399352 CITED1Q99966 193 aa13.27□□□□□ -0.29
ITSN1-209ENST00000399352 JPT2Q9H910 190 aa13.27□□□□□ -0.29
ITSN1-209ENST00000399352 LAMTOR3Q9UHA4 124 aa13.27□□□□□ -0.29
ITSN1-209ENST00000399352 FREM3P0C091 2139 aa13.27□□□□□ -0.29
ITSN1-209ENST00000399352 SMAD7O15105 426 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms