RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 NEUROG1Q92886 237 aa13.33□□□□□ -0.28
PCDHA12-201ENST00000398631 GGTLC1Q9BX51 225 aa13.33□□□□□ -0.28
PCDHA12-201ENST00000398631 ST20Q9HBF5 79 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 BEX4Q9NWD9 120 aaPredicted RBP13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 ANK1P16157 1881 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 SPSB3Q6PJ21 355 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 TCF20Q9UGU0 1960 aaKnown RBP13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 TRGV11A0A075B6L2 103 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 VWA8A3KMH1 1905 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 SCGB1A1P11684 91 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 SLC25A16P16260 332 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 CD33P20138 364 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 PCP4P48539 62 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 CMC4P56277 68 aaPredicted RBP13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 SUPT4H1P63272 117 aaKnown RBP13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 MED13LQ71F56 2210 aa13.32□□□□□ -0.28
PCDHA12-201ENST00000398631 CYB5R2Q6BCY4 276 aa13.31□□□□□ -0.28
PCDHA12-201ENST00000398631 PSG1P11464 419 aa13.31□□□□□ -0.28
PCDHA12-201ENST00000398631 Q6P435 159 aa13.31□□□□□ -0.28
PCDHA12-201ENST00000398631 WFDC1Q9HC57 220 aa13.31□□□□□ -0.28
PCDHA12-201ENST00000398631 PPBPP02775 128 aa13.31□□□□□ -0.28
PCDHA12-201ENST00000398631 COQ2Q96H96 371 aa13.31□□□□□ -0.28
PCDHA12-201ENST00000398631 IGKV1D-17A0A075B6S4 117 aa13.31□□□□□ -0.28
PCDHA12-201ENST00000398631 TMEM190Q8WZ59 177 aa13.31□□□□□ -0.28
PCDHA12-201ENST00000398631 IGKV1-5P01602 117 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 CACNG7P62955 275 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 NMSQ5H8A3 153 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 OCC1Q8TAD7 63 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 TMEM170AQ8WVE7 144 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 PRDM13Q9H4Q3 707 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 H0YJW9 148 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 STAG3L3P0CL85 134 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 TDGF1P13385 188 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 MPDZO75970 2070 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 TRGV4A0A0C4DH28 118 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 IFI27P40305 119 aaPredicted RBP13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 CRIM1Q9NZV1 1036 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 FAM208BQ5VWN6 2430 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 TMEM8BA6NDV4 472 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 BUB1B-PAK6H3BSN5 160 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 SRD5A1P18405 259 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 TMEM155Q4W5P6 130 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 TTC32Q5I0X7 151 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 FAM19A2Q8N3H0 131 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 VCX2Q9H322 139 aa13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 PHF3Q92576 2039 aaKnown RBP13.3□□□□□ -0.28
PCDHA12-201ENST00000398631 PMS2P5A8MQ11 134 aa13.29□□□□□ -0.28
PCDHA12-201ENST00000398631 CFAP161Q6P656 301 aa13.29□□□□□ -0.28
PCDHA12-201ENST00000398631 BPESC1Q9GZL8 116 aa13.29□□□□□ -0.28
PCDHA12-201ENST00000398631 TRAV5A0A0B4J249 113 aa13.29□□□□□ -0.28
PCDHA12-201ENST00000398631 CD5P06127 495 aa13.29□□□□□ -0.28
PCDHA12-201ENST00000398631 COL8A2P25067 703 aa13.29□□□□□ -0.28
PCDHA12-201ENST00000398631 PPIFP30405 207 aaKnown RBP13.29□□□□□ -0.28
PCDHA12-201ENST00000398631 E7EQL1 145 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 SAP30O75446 220 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 LY6HO94772 140 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 TRGV9Q99603 122 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 LRRK1Q38SD2 2015 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 C3orf36Q3SXR2 165 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 SSBP4Q9BWG4 385 aaPredicted RBP13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 NXT2Q9NPJ8 142 aaKnown RBP13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 F2Z2F3 143 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 CNTFRP26992 372 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 HGFACQ04756 655 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 VSIRQ9H7M9 311 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 PGPEP1LA6NFU8 196 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 KLF17Q5JT82 389 aaPredicted RBP13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 TEX38Q6PEX7 206 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 TMEM14EPQ6UXP3 125 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 NDUFAF3Q9BU61 184 aa13.28□□□□□ -0.28
PCDHA12-201ENST00000398631 TRAV3A0A0B4J244 114 aa13.27□□□□□ -0.28
PCDHA12-201ENST00000398631 SIGLEC9Q9Y336 463 aa13.27□□□□□ -0.28
PCDHA12-201ENST00000398631 PRTN3P24158 256 aa13.27□□□□□ -0.28
PCDHA12-201ENST00000398631 RPL15P61313 204 aaKnown RBP13.27□□□□□ -0.28
PCDHA12-201ENST00000398631 GLRX5Q86SX6 157 aa13.27□□□□□ -0.28
PCDHA12-201ENST00000398631 KIR3DL3Q8N743 410 aa13.27□□□□□ -0.28
PCDHA12-201ENST00000398631 SLC25A39Q9BZJ4 359 aaPredicted RBP13.27□□□□□ -0.28
PCDHA12-201ENST00000398631 CYSLTR1Q9Y271 337 aa13.27□□□□□ -0.28
PCDHA12-201ENST00000398631 NPIPB5A8MRT5 1133 aa13.27□□□□□ -0.29
PCDHA12-201ENST00000398631 RNF144BQ7Z419 303 aa13.27□□□□□ -0.29
PCDHA12-201ENST00000398631 C14orf144Q96I85 54 aa13.27□□□□□ -0.29
PCDHA12-201ENST00000398631 CLDN16Q9Y5I7 305 aa13.27□□□□□ -0.29
PCDHA12-201ENST00000398631 LYPD2Q6UXB3 125 aa13.27□□□□□ -0.29
PCDHA12-201ENST00000398631 LINC00473A8K010 186 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 SERF1AO75920 110 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 Q6ZS49 121 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 NIT1Q86X76 327 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 SSC4DQ8WTU2 575 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 TSKUQ8WUA8 353 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 SCRT1Q9BWW7 348 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 RLFQ13129 1914 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 FNDC1Q4ZHG4 1894 aaPredicted RBP13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 QRFPP83859 136 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 SRSF1Q07955 248 aaKnown RBP eCLIP13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 TP53BP1Q12888 1972 aaPredicted RBP13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 ZFHX2Q9C0A1 2572 aaPredicted RBP13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 TRBV7-1A0A0A6YYK4 115 aa13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 PRR30Q53SZ7 412 aaPredicted RBP13.26□□□□□ -0.29
PCDHA12-201ENST00000398631 C9orf139Q6ZV77 190 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms