RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 HNRNPCP07910 306 aaKnown RBP eCLIP19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 CRYBB3P26998 211 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 CAV2P51636 162 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 RRAS2P62070 204 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 ZNF90Q03938 601 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 OR2F1Q13607 317 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 RAB32Q13637 225 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 TRGV9Q99603 122 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 PBDC1Q9BVG4 233 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 VSIRQ9H7M9 311 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 MGAT4CQ9UBM8 478 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 PFDN2Q9UHV9 154 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 RABAC1Q9UI14 185 aa19.03■□□□□ 0.64
TSPAN4-207ENST00000397411 DFFBO76075 338 aa19.02■□□□□ 0.64
TSPAN4-207ENST00000397411 RLN2P04090 185 aa19.02■□□□□ 0.64
TSPAN4-207ENST00000397411 TFPI2P48307 235 aa19.02■□□□□ 0.64
TSPAN4-207ENST00000397411 CYCSP99999 105 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-207ENST00000397411 THAP8Q8NA92 274 aa19.02■□□□□ 0.64
TSPAN4-207ENST00000397411 IGKV1D-37A0A075B6S9 117 aa19.01■□□□□ 0.63
TSPAN4-207ENST00000397411 DNASE2O00115 360 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-207ENST00000397411 CCNKO75909 580 aa19.01■□□□□ 0.63
TSPAN4-207ENST00000397411 NHLRC4P0CG21 123 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-207ENST00000397411 GBGT1Q8N5D6 347 aa19.01■□□□□ 0.63
TSPAN4-207ENST00000397411 DEFB125Q8N687 156 aa19.01■□□□□ 0.63
TSPAN4-207ENST00000397411 RNF125Q96EQ8 232 aa19.01■□□□□ 0.63
TSPAN4-207ENST00000397411 PRKDCP78527 4128 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-207ENST00000397411 PMS2P5A8MQ11 134 aa19■□□□□ 0.63
TSPAN4-207ENST00000397411 LYZP61626 148 aa19■□□□□ 0.63
TSPAN4-207ENST00000397411 DLK1P80370 383 aa19■□□□□ 0.63
TSPAN4-207ENST00000397411 USF2Q15853 346 aaPredicted RBP19■□□□□ 0.63
TSPAN4-207ENST00000397411 TMEM144Q7Z5S9 345 aa19■□□□□ 0.63
TSPAN4-207ENST00000397411 WFDC3Q8IUB2 231 aa19■□□□□ 0.63
TSPAN4-207ENST00000397411 LILRB2Q8N423 598 aa19■□□□□ 0.63
TSPAN4-207ENST00000397411 FAM24AA6NFZ4 105 aa18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 A8MZ25 164 aa18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 P2RY1P47900 373 aa18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 EIF2B2P49770 351 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 IL15RAQ13261 267 aa18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 PPP1R14BQ96C90 147 aa18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 NMES1Q9C002 83 aa18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 NPVFQ9HCQ7 196 aa18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 C19orf73Q9NVV2 129 aa18.99■□□□□ 0.63
TSPAN4-207ENST00000397411 CFDP00746 253 aaPredicted RBP18.98■□□□□ 0.63
TSPAN4-207ENST00000397411 CMC4P56277 68 aaPredicted RBP18.98■□□□□ 0.63
TSPAN4-207ENST00000397411 FAM90A2PQ658T7 463 aa18.98■□□□□ 0.63
TSPAN4-207ENST00000397411 BPIFCQ8NFQ6 507 aa18.98■□□□□ 0.63
TSPAN4-207ENST00000397411 SRD5A3Q9H8P0 318 aa18.98■□□□□ 0.63
TSPAN4-207ENST00000397411 UBQLN2Q9UHD9 624 aa18.98■□□□□ 0.63
TSPAN4-207ENST00000397411 TGP01266 2768 aa18.97■□□□□ 0.63
TSPAN4-207ENST00000397411 IGKV1OR2-108A0A075B7D4 117 aa18.97■□□□□ 0.63
TSPAN4-207ENST00000397411 LRRC37A5PQ49AS3 106 aa18.97■□□□□ 0.63
TSPAN4-207ENST00000397411 SBSPONQ8IVN8 264 aa18.97■□□□□ 0.63
TSPAN4-207ENST00000397411 WFDC10AQ9H1F0 79 aa18.97■□□□□ 0.63
TSPAN4-207ENST00000397411 ALG5Q9Y673 324 aa18.97■□□□□ 0.63
TSPAN4-207ENST00000397411 HELTA6NFD8 242 aa18.96■□□□□ 0.63
TSPAN4-207ENST00000397411 FNDC10F2Z333 226 aa18.96■□□□□ 0.63
TSPAN4-207ENST00000397411 DEDDO75618 318 aa18.96■□□□□ 0.63
TSPAN4-207ENST00000397411 CST7O76096 145 aa18.96■□□□□ 0.63
TSPAN4-207ENST00000397411 NUP62P37198 522 aaPredicted RBP18.96■□□□□ 0.63
TSPAN4-207ENST00000397411 GGACTQ9BVM4 153 aa18.96■□□□□ 0.63
TSPAN4-207ENST00000397411 U3KQE9 123 aa18.96■□□□□ 0.63
TSPAN4-207ENST00000397411 SLC38A11Q08AI6 406 aa18.95■□□□□ 0.62
TSPAN4-207ENST00000397411 ARL16Q0P5N6 197 aa18.95■□□□□ 0.62
TSPAN4-207ENST00000397411 RGS21Q2M5E4 152 aa18.95■□□□□ 0.62
TSPAN4-207ENST00000397411 STX12Q86Y82 276 aa18.95■□□□□ 0.62
TSPAN4-207ENST00000397411 TMEM217Q8N7C4 229 aa18.95■□□□□ 0.62
TSPAN4-207ENST00000397411 STXBP6Q8NFX7 210 aa18.95■□□□□ 0.62
TSPAN4-207ENST00000397411 MS4A6AQ9H2W1 248 aa18.95■□□□□ 0.62
TSPAN4-207ENST00000397411 LYRM2Q9NU23 88 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-207ENST00000397411 AP2S1P53680 142 aaPredicted RBP18.94■□□□□ 0.62
TSPAN4-207ENST00000397411 TEPPQ6URK8 271 aa18.94■□□□□ 0.62
TSPAN4-207ENST00000397411 C16orf54Q6UWD8 224 aa18.94■□□□□ 0.62
TSPAN4-207ENST00000397411 CYP2G1PQ6ZSU1 146 aa18.94■□□□□ 0.62
TSPAN4-207ENST00000397411 C11orf1Q9H5F2 150 aa18.94■□□□□ 0.62
TSPAN4-207ENST00000397411 E5RGE8 158 aa18.93■□□□□ 0.62
TSPAN4-207ENST00000397411 ORM2P19652 201 aa18.93■□□□□ 0.62
TSPAN4-207ENST00000397411 GATA2P23769 480 aaPredicted RBP18.93■□□□□ 0.62
TSPAN4-207ENST00000397411 S100A7P31151 101 aa18.93■□□□□ 0.62
TSPAN4-207ENST00000397411 HBG1P69891 147 aa18.93■□□□□ 0.62
TSPAN4-207ENST00000397411 HBG2P69892 147 aa18.93■□□□□ 0.62
TSPAN4-207ENST00000397411 ZMAT4Q9H898 229 aa18.93■□□□□ 0.62
TSPAN4-207ENST00000397411 SULT1A1P50225 295 aa18.92■□□□□ 0.62
TSPAN4-207ENST00000397411 H2BFSP57053 126 aa18.92■□□□□ 0.62
TSPAN4-207ENST00000397411 SELENOTP62341 195 aa18.92■□□□□ 0.62
TSPAN4-207ENST00000397411 TMEM252Q8N6L7 170 aa18.92■□□□□ 0.62
TSPAN4-207ENST00000397411 SLC25A31Q9H0C2 315 aa18.92■□□□□ 0.62
TSPAN4-207ENST00000397411 MED28Q9H204 178 aa18.92■□□□□ 0.62
TSPAN4-207ENST00000397411 BUB3O43684 328 aa18.91■□□□□ 0.62
TSPAN4-207ENST00000397411 S100A11P31949 105 aa18.91■□□□□ 0.62
TSPAN4-207ENST00000397411 RAB31Q13636 194 aa18.91■□□□□ 0.62
TSPAN4-207ENST00000397411 OR1B1Q8NGR6 318 aa18.91■□□□□ 0.62
TSPAN4-207ENST00000397411 TMEM147Q9BVK8 224 aa18.91■□□□□ 0.62
TSPAN4-207ENST00000397411 TRAV2A0A0B4J234 112 aa18.9■□□□□ 0.62
TSPAN4-207ENST00000397411 IGSF23A1L1A6 192 aa18.9■□□□□ 0.62
TSPAN4-207ENST00000397411 HAGHQ16775 308 aa18.9■□□□□ 0.62
TSPAN4-207ENST00000397411 SIGLEC15Q6ZMC9 328 aa18.9■□□□□ 0.62
TSPAN4-207ENST00000397411 TMEM182Q6ZP80 229 aaPredicted RBP18.9■□□□□ 0.62
TSPAN4-207ENST00000397411 PPP1R1CQ8WVI7 109 aa18.9■□□□□ 0.62
TSPAN4-207ENST00000397411 GLMPQ8WWB7 406 aa18.9■□□□□ 0.62
TSPAN4-207ENST00000397411 UQCC1Q9NVA1 299 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms