RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 NSUN5P1Q3KNT7 163 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 SLC35E3Q7Z769 313 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 TMPRSS5Q9H3S3 457 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 TNCP24821 2201 aa13.67□□□□□ -0.22
TNFSF13-205ENST00000396545 ADARB2-AS1A8MUL3 147 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 H3BQ15 152 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 STAG3L2P0CL84 134 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 STAG3L3P0CL85 134 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 CD81P60033 236 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 MLANAQ16655 118 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 NDUFA11Q86Y39 141 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 SLC35E1Q96K37 410 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 WNT10AQ9GZT5 417 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 SMCO4Q9NRQ5 59 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 PITPNC1Q9UKF7 332 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 NCBP2LA6PVI3 153 aaKnown RBP13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 TEX22C9J3V5 150 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 M0R036 132 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 MEF2BQ02080 365 aaPredicted RBP13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 OXLD1Q5BKU9 147 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 ZNF562Q6V9R5 426 aa13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 FNDC4Q9H6D8 234 aaPredicted RBP13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 PUS1Q9Y606 427 aaKnown RBP eCLIP13.66□□□□□ -0.22
TNFSF13-205ENST00000396545 CNIH1O95406 144 aa13.65□□□□□ -0.22
TNFSF13-205ENST00000396545 OR4F17Q8NGA8 305 aa13.65□□□□□ -0.22
TNFSF13-205ENST00000396545 SRSF12Q8WXF0 261 aaKnown RBP13.65□□□□□ -0.22
TNFSF13-205ENST00000396545 OR4F4Q96R69 305 aa13.65□□□□□ -0.22
TNFSF13-205ENST00000396545 CITED2Q99967 270 aaPredicted RBP13.65□□□□□ -0.22
TNFSF13-205ENST00000396545 PRSS22Q9GZN4 317 aa13.65□□□□□ -0.22
TNFSF13-205ENST00000396545 TUBA4BQ9H853 241 aa13.65□□□□□ -0.22
TNFSF13-205ENST00000396545 RPS10P5Q9NQ39 176 aa13.65□□□□□ -0.22
TNFSF13-205ENST00000396545 TMEM250H0YL14 139 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 HLA-DRB1P01911 266 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 CRYGCP07315 174 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 CD24P25063 80 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 OR10J1P30954 320 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 RHOBP62745 196 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 Q6ZS46 218 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 THAP8Q8NA92 274 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 OR1L6Q8NGR2 347 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 NIPSNAP3BQ9BS92 247 aa13.64□□□□□ -0.23
TNFSF13-205ENST00000396545 CORTO00230 105 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 CXorf1O96002 111 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 AREGP15514 252 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 CEBPGP53567 150 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 BLCAPP62952 87 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 Q8N9W7 124 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 OR1P1Q8NH06 330 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 ABHD5Q8WTS1 349 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 GATAD1Q8WUU5 269 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 TVP23CQ96ET8 276 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 RBM14Q96PK6 669 aaKnown RBP13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 RASL11BQ9BPW5 248 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
TNFSF13-205ENST00000396545 M0QZK8 103 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 FCN1O00602 326 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 PAGE4O60829 102 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 REG1AP05451 166 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 MFAP2P55001 183 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 GNB1P62873 340 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 FXYD3Q14802 87 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 ETFRF1Q6IPR1 90 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 CYP2G1PQ6ZSU1 146 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 C16orf82Q7Z2V1 217 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 F11RQ9Y624 299 aaKnown RBP13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 ARL14EPLP0DKL9 152 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 AKR1C3P42330 323 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 PNRC1Q12796 327 aaPredicted RBP13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 TMEM95Q3KNT9 176 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 AKIRIN2Q53H80 203 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 MRAPQ8TCY5 172 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 SEPSECSQ9HD40 501 aaKnown RBP13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 MOB4Q9Y3A3 225 aa13.62□□□□□ -0.23
TNFSF13-205ENST00000396545 NBEAL2Q6ZNJ1 2754 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 A0A087WWC5 75 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 PSMB11A5LHX3 300 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 OR5G3P0C626 314 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 IQCF2Q8IXL9 164 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 C15orf54Q8N8G6 183 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 ARPC1AQ92747 370 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 ACY3Q96HD9 319 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 TMEM68Q96MH6 324 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 AURKAIP1Q9NWT8 199 aaPredicted RBP13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 FUT9Q9Y231 359 aa13.61□□□□□ -0.23
TNFSF13-205ENST00000396545 COL7A1Q02388 2944 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 LOC105371267A0A1B0GV96 52 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 COLCA2A8K830 154 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 GCHFRP30047 84 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 CX3CL1P78423 397 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 SPATA31B1PQ5VZV4 182 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 NPIPB3Q92617 1050 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 TXNDC17Q9BRA2 123 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 SLC25A33Q9BSK2 321 aa13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 MRPL36Q9P0J6 103 aaKnown RBP13.6□□□□□ -0.23
TNFSF13-205ENST00000396545 TCRBV4S1A1TA0A5B7 111 aa13.59□□□□□ -0.23
TNFSF13-205ENST00000396545 B4DEV8 164 aa13.59□□□□□ -0.23
TNFSF13-205ENST00000396545 SDF2L1Q9HCN8 221 aa13.59□□□□□ -0.23
TNFSF13-205ENST00000396545 C11orf94C9JXX5 98 aa13.58□□□□□ -0.23
TNFSF13-205ENST00000396545 MT-CO2P00403 227 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms