RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 PGPEP1Q9NXJ5 209 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 ATP23Q9Y6H3 246 aa7.01□□□□□ -1.29
NDE1-202ENST00000396355 hCG_38984A0A1B0GV85 526 aa7□□□□□ -1.29
NDE1-202ENST00000396355 A0A1W2PQD3 144 aa7□□□□□ -1.29
NDE1-202ENST00000396355 IFITM1P13164 125 aa7□□□□□ -1.29
NDE1-202ENST00000396355 YPEL3P61236 119 aaPredicted RBP7□□□□□ -1.29
NDE1-202ENST00000396355 DUX4L9Q6RFH8 374 aaPredicted RBP7□□□□□ -1.29
NDE1-202ENST00000396355 FAM159AQ6UWV7 190 aa7□□□□□ -1.29
NDE1-202ENST00000396355 KCNK17Q96T54 332 aa7□□□□□ -1.29
NDE1-202ENST00000396355 TTTY13Q9BZ97 58 aa7□□□□□ -1.29
NDE1-202ENST00000396355 LMO7DNF2Z398 122 aa7□□□□□ -1.29
NDE1-202ENST00000396355 MS4A18H0YCH9 400 aa7□□□□□ -1.29
NDE1-202ENST00000396355 P04436 131 aa7□□□□□ -1.29
NDE1-202ENST00000396355 LGALS4P56470 323 aa7□□□□□ -1.29
NDE1-202ENST00000396355 IL15RAQ13261 267 aa7□□□□□ -1.29
NDE1-202ENST00000396355 MS4A18Q3C1V0 323 aa7□□□□□ -1.29
NDE1-202ENST00000396355 FGFRL1Q8N441 504 aa7□□□□□ -1.29
NDE1-202ENST00000396355 JMJD8Q96S16 334 aa7□□□□□ -1.29
NDE1-202ENST00000396355 IGHMP01871 453 aa7□□□□□ -1.29
NDE1-202ENST00000396355 GCHFRP30047 84 aa7□□□□□ -1.29
NDE1-202ENST00000396355 GTSCR1Q86UQ5 136 aa7□□□□□ -1.29
NDE1-202ENST00000396355 GGTLC1Q9BX51 225 aa7□□□□□ -1.29
NDE1-202ENST00000396355 PKIGQ9Y2B9 76 aa7□□□□□ -1.29
NDE1-202ENST00000396355 CCDC168Q8NDH2 2452 aa7□□□□□ -1.29
NDE1-202ENST00000396355 DOPEY1Q5JWR5 2465 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 NCOA6Q14686 2063 aaPredicted RBP6.99□□□□□ -1.29
NDE1-202ENST00000396355 A0A1W2PQM1 296 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 SPINT2O43291 252 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 DHRS3O75911 302 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 TIAF1O95411 115 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 IGHV3-48P01763 117 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 HERVK_113P61574 105 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 ID3Q02535 119 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 C5orf64Q2M2E5 130 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 OR4X2Q8NGF9 303 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 PP6455Q8WZ26 134 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 IGKV1D-13A0A0B4J2D9 117 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 TMEM262E9PQX1 116 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 FCGR3BO75015 233 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 IGKV1-13P0DP09 117 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 CTRLP40313 264 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 IGFBP7Q16270 282 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 LOC400499M0QZD8 3231 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 IGHV1OR21-1A0A087WYE8 117 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 A8MWV9 139 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 K7ENP7 123 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 INO80CQ6PI98 192 aaPredicted RBP6.99□□□□□ -1.29
NDE1-202ENST00000396355 RPEQ96AT9 228 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 RAB1BQ9H0U4 201 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 C1RLQ9NZP8 487 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 TP53TG3Q9ULZ0 132 aa6.99□□□□□ -1.29
NDE1-202ENST00000396355 OR11H12B2RN74 326 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 CCDC179H3BU77 68 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 TNFSF11O14788 317 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 COX7A2P2O60397 106 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 OR9G9P0C7N8 305 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 ORM2P19652 201 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 ZNF585BQ52M93 769 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 PCP2Q8IVA1 136 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 ABHD12Q8N2K0 398 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 OR11H1Q8NG94 326 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 OR11H2Q8NH07 326 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 ABHD17AQ96GS6 310 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 ZNF488Q96MN9 340 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 AGMATQ9BSE5 352 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 MRPL27Q9P0M9 148 aaKnown RBP6.98□□□□□ -1.29
NDE1-202ENST00000396355 SPG11Q96JI7 2443 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 ZFHX4Q86UP3 3567 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 F8W1H4 67 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 ETV2O00321 342 aaPredicted RBP6.98□□□□□ -1.29
NDE1-202ENST00000396355 EFNA2O43921 213 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 CEACAM4O75871 244 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 HBBP68871 147 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 TCTEX1D4Q5JR98 221 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 WIPI1Q5MNZ9 446 aaPredicted RBP6.98□□□□□ -1.29
NDE1-202ENST00000396355 OR4F17Q8NGA8 305 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 LINC00479Q96M42 142 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 KIR2DL4Q99706 377 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 LIME1Q9H400 295 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 ZNF391Q9UJN7 358 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 A0A0G2JRQ6 117 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 CX3CL1P78423 397 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 IL36GQ9NZH8 169 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 PCNX1Q96RV3 2341 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 C2CD3Q4AC94 2353 aa6.98□□□□□ -1.29
NDE1-202ENST00000396355 USF3Q68DE3 2245 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 TRAV24A0A0B4J272 114 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 IZUMO1RA6ND01 250 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 LRRC30A6NM36 301 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 NPIPB11E5RHQ5 1161 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 TMPRSS2O15393 492 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 TNFRSF6BO95407 300 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 WNT2P09544 360 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 DECR2Q9NUI1 292 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 ONECUT1Q9UBC0 465 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 EPDR1Q9UM22 224 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 KLF12Q9Y4X4 402 aa6.97□□□□□ -1.29
NDE1-202ENST00000396355 NCBP2LA6PVI3 153 aaKnown RBP6.97□□□□□ -1.29
NDE1-202ENST00000396355 IGHV4-39P01824 125 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms