RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 LCN15Q6UWW0 184 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 OR51G1Q8NGK1 321 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 OR1B1Q8NGR6 318 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 LYPD6BQ8NI32 183 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 RAB24Q969Q5 203 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 CHRDL1Q9BU40 450 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 C19orf24Q9BVV8 132 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 GNB4Q9HAV0 340 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 DNAJC4Q9NNZ3 241 aa15.83■□□□□ 0.12
VCPKMT-202ENST00000395860 MAP1LC3B2A6NCE7 125 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 HMGB3O15347 200 aaKnown RBP15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 TGOLN2O43493 480 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 EIF3GO75821 320 aaKnown RBP eCLIP15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 OR5G3P0C626 314 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 ORM2P19652 201 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 ADMP35318 185 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 LYZP61626 148 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 FAM78BQ5VT40 261 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 KLHDC1Q8N7A1 406 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 Q8WTZ3 238 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 GATAD1Q8WUU5 269 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 MBD3L1Q8WWY6 194 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 TMEM37Q8WXS4 190 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 MAP1LC3BQ9GZQ8 125 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 HBE1P02100 147 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 C10orf113Q5VZT2 155 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 COMMD7Q86VX2 200 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 COMMD1Q8N668 190 aa15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 SEPSECSQ9HD40 501 aaKnown RBP15.82■□□□□ 0.12
VCPKMT-202ENST00000395860 CUBNO60494 3623 aa15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 RPLP1P05386 114 aaKnown RBP15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 FGF8P55075 233 aaPredicted RBP15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 PLP1P60201 277 aa15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 SPSB3Q6PJ21 355 aa15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 OR4X2Q8NGF9 303 aa15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 RNF2Q99496 336 aa15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 PBDC1Q9BVG4 233 aa15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 C16orf95Q9H693 158 aa15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 MED9Q9NWA0 146 aa15.81■□□□□ 0.12
VCPKMT-202ENST00000395860 ELOA3CA0A087WX78 387 aaPredicted RBP15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 PPP5D1E7EU14 171 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 HYPMO75409 117 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 ZNF343Q6P1L6 599 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 PATE2Q6UY27 113 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 FUT9Q9Y231 359 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 NSD1Q96L73 2696 aaPredicted RBP15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 TRAV1-1A0A0B4J248 108 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 IL4P05112 153 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 ARL3P36405 182 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 SPATA31B1PQ5VZV4 182 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 ZNF600Q6ZNG1 722 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 ZNF491Q8N8L2 437 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 RNF152Q8N8N0 203 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 OR5AU1Q8NGC0 362 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 RNF125Q96EQ8 232 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 MRPL32Q9BYC8 188 aaKnown RBP15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 F8P00451 2351 aa15.8■□□□□ 0.12
VCPKMT-202ENST00000395860 FN1P02751 2386 aaKnown RBP15.79■□□□□ 0.12
VCPKMT-202ENST00000395860 ANKRD34BA5PLL1 514 aa15.79■□□□□ 0.12
VCPKMT-202ENST00000395860 KIAA0141Q14154 515 aaPredicted RBP15.79■□□□□ 0.12
VCPKMT-202ENST00000395860 IL34Q6ZMJ4 242 aa15.79■□□□□ 0.12
VCPKMT-202ENST00000395860 MIR17HGQ75NE6 70 aa15.79■□□□□ 0.12
VCPKMT-202ENST00000395860 MARC2Q969Z3 335 aa15.79■□□□□ 0.12
VCPKMT-202ENST00000395860 UHRF2Q96PU4 802 aa15.79■□□□□ 0.12
VCPKMT-202ENST00000395860 PUS1Q9Y606 427 aaKnown RBP eCLIP15.79■□□□□ 0.12
VCPKMT-202ENST00000395860 IGHV3-35A0A0C4DH35 117 aa15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 WI2-2373I1.2A0A1W2PRP0 233 aa15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 NUDT19A8MXV4 375 aa15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 NDUFA7O95182 113 aa15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 OR2C1O95371 312 aa15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 RELQ04864 619 aaPredicted RBP15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 LINC01006Q8NI28 216 aa15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 MYOZ3Q8TDC0 251 aa15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 HIGD1AQ9Y241 93 aa15.78■□□□□ 0.12
VCPKMT-202ENST00000395860 TRBV12-3P01733 135 aa15.77■□□□□ 0.12
VCPKMT-202ENST00000395860 STAG3L2P0CL84 134 aa15.77■□□□□ 0.12
VCPKMT-202ENST00000395860 STAG3L3P0CL85 134 aa15.77■□□□□ 0.12
VCPKMT-202ENST00000395860 CCL20P78556 96 aa15.77■□□□□ 0.12
VCPKMT-202ENST00000395860 FAM209BQ5JX69 171 aa15.77■□□□□ 0.12
VCPKMT-202ENST00000395860 LINC00305Q7Z4B0 112 aa15.77■□□□□ 0.12
VCPKMT-202ENST00000395860 OR5B12Q96R08 314 aa15.77■□□□□ 0.12
VCPKMT-202ENST00000395860 TAS2R45P59539 299 aa15.77■□□□□ 0.11
VCPKMT-202ENST00000395860 UBE2E2Q96LR5 201 aa15.77■□□□□ 0.11
VCPKMT-202ENST00000395860 TECRQ9NZ01 308 aaKnown RBP15.77■□□□□ 0.11
VCPKMT-202ENST00000395860 SRSF2Q01130 221 aaKnown RBP15.76■□□□□ 0.11
VCPKMT-202ENST00000395860 IQCF2Q8IXL9 164 aa15.76■□□□□ 0.11
VCPKMT-202ENST00000395860 OR4F5Q8NH21 305 aa15.76■□□□□ 0.11
VCPKMT-202ENST00000395860 MRPL27Q9P0M9 148 aaKnown RBP15.76■□□□□ 0.11
VCPKMT-202ENST00000395860 PEF1Q9UBV8 284 aaKnown RBP15.76■□□□□ 0.11
VCPKMT-202ENST00000395860 CXorf1O96002 111 aa15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 ARL14EPLP0DKL9 152 aa15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 USF2Q15853 346 aaPredicted RBP15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 MORN5Q5VZ52 161 aa15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 CITED4Q96RK1 184 aa15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 C8orf88P0DMB2 117 aa15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 KHDC3LQ587J8 217 aa15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 TOMM20LQ6UXN7 152 aa15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 ZNF414Q96IQ9 312 aa15.75■□□□□ 0.11
VCPKMT-202ENST00000395860 TMPRSS5Q9H3S3 457 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms