RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 SLC25A33Q9BSK2 321 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 TMEM242Q9NWH2 141 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 TECRQ9NZ01 308 aaKnown RBP11.9□□□□□ -0.51
SCAF11-204ENST00000395454 NAT8Q9UHE5 227 aa11.9□□□□□ -0.51
SCAF11-204ENST00000395454 JMJD1CQ15652 2540 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 CXorf65A6NEN9 183 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 ZNF727A8MUV8 499 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 CNIH1O95406 144 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 FOLR2P14207 255 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 NPPCP23582 126 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 TAS2R45P59539 299 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 PLP1P60201 277 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 C19orf35Q6ZS72 473 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 TMEM219Q86XT9 240 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 IQCF2Q8IXL9 164 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 ZNF503Q96F45 646 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 SMIM7Q9BQ49 75 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 PARLQ9H300 379 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 DNAJC4Q9NNZ3 241 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 TMEM167BQ9NRX6 74 aa11.89□□□□□ -0.51
SCAF11-204ENST00000395454 SETD2Q9BYW2 2564 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-204ENST00000395454 LOC105371267A0A1B0GV96 52 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 HLA-DRB1P01911 266 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 TMEM11P17152 192 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 CX3CL1P78423 397 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 ZNF90Q03938 601 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 KLK9Q2XQG4 91 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 ASPHD1Q5U4P2 390 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 Q8N9W7 124 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 OR1L4Q8NGR5 311 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 OR4X1Q8NH49 305 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 OR5R1Q8NH85 324 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 ARPC1AQ92747 370 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 FAM167A-AS1Q96KT0 104 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 C1RLQ9NZP8 487 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 DOK5Q9P104 306 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 KLK9Q9UKQ9 250 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 C8orf88P0DMB2 117 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 ATP5G3P48201 142 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 NDPQ00604 133 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 C11orf52Q96A22 123 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 WNT10AQ9GZT5 417 aa11.88□□□□□ -0.51
SCAF11-204ENST00000395454 ELOA3CA0A087WX78 387 aaPredicted RBP11.87□□□□□ -0.51
SCAF11-204ENST00000395454 K7EIM0 57 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 MT-ND4LP03901 98 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 IGLC1P0CG04 106 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 APELAP0DMC3 54 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 TMEM241Q24JQ0 296 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 PATE2Q6UY27 113 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 TTC9CQ8N5M4 171 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 HIST1H2BAQ96A08 127 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 PITPNC1Q9UKF7 332 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 VPREB3Q9UKI3 123 aa11.87□□□□□ -0.51
SCAF11-204ENST00000395454 YTHDF2Q9Y5A9 579 aaKnown RBP11.87□□□□□ -0.51
SCAF11-204ENST00000395454 DNAJC9-AS1A6NH13 148 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 IGHV3-48P01763 117 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 RNF212Q495C1 297 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 AKIRIN2Q53H80 203 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 ESM1Q9NQ30 184 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 IGLV11-55A0A075B6I3 123 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 NCBP2LA6PVI3 153 aaKnown RBP11.86□□□□□ -0.51
SCAF11-204ENST00000395454 ATF4P18848 351 aaPredicted RBP11.86□□□□□ -0.51
SCAF11-204ENST00000395454 HILS1P60008 231 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 UBE2G2P60604 165 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 OR51G1Q8NGK1 321 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 RPUSD4Q96CM3 377 aaKnown RBP11.86□□□□□ -0.51
SCAF11-204ENST00000395454 SLC25A2Q9BXI2 301 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 PRELID1Q9Y255 219 aa11.86□□□□□ -0.51
SCAF11-204ENST00000395454 IGHV7-81A0A0B4J1V7 117 aa11.85□□□□□ -0.51
SCAF11-204ENST00000395454 COX7A2P2O60397 106 aa11.85□□□□□ -0.51
SCAF11-204ENST00000395454 EGR2P11161 476 aaPredicted RBP11.85□□□□□ -0.51
SCAF11-204ENST00000395454 C10orf113Q5VZT2 155 aa11.85□□□□□ -0.51
SCAF11-204ENST00000395454 CST9LP1Q5W188 147 aa11.85□□□□□ -0.51
SCAF11-204ENST00000395454 FANCD2OSQ96PS1 177 aa11.85□□□□□ -0.51
SCAF11-204ENST00000395454 CTDSP1Q9GZU7 261 aa11.85□□□□□ -0.51
SCAF11-204ENST00000395454 A6NDX4 124 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 TCF21O43680 179 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 OR2C1O95371 312 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 RPL23P62829 140 aaKnown RBP11.84□□□□□ -0.51
SCAF11-204ENST00000395454 MORN5Q5VZ52 161 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 TMEM86BQ8N661 226 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 ISOC2Q96AB3 205 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 RBM14Q96PK6 669 aaKnown RBP11.84□□□□□ -0.51
SCAF11-204ENST00000395454 JMJD8Q96S16 334 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 A0A1W2PRE2 83 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 FAM103A1Q9BTL3 118 aaKnown RBP11.84□□□□□ -0.51
SCAF11-204ENST00000395454 ZNF355PQ9NSJ1 428 aa11.84□□□□□ -0.51
SCAF11-204ENST00000395454 IGKV1-17P01599 117 aa11.83□□□□□ -0.52
SCAF11-204ENST00000395454 CRYBA1P05813 215 aa11.83□□□□□ -0.52
SCAF11-204ENST00000395454 OR7C2O60412 319 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 NDUFB4O95168 129 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 ZNF674Q2M3X9 581 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 STXBP6Q8NFX7 210 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 MOB4Q9Y3A3 225 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 CLDN34H7C241 214 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 RAB5AP20339 215 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 FLI1Q01543 452 aaPredicted RBP11.82□□□□□ -0.52
SCAF11-204ENST00000395454 ELOBQ15370 118 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 OR5AU1Q8NGC0 362 aa11.82□□□□□ -0.52
SCAF11-204ENST00000395454 SGMS2Q8NHU3 365 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms