RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ASCL4Q6XD76 172 aa16.28■□□□□ 0.2
SHANK1-203ENST00000391813 FOXF2Q12947 444 aa16.28■□□□□ 0.2
SHANK1-203ENST00000391813 FBXL7Q9UJT9 491 aa16.28■□□□□ 0.2
SHANK1-203ENST00000391813 A0A0G2JMM0 328 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 A0A1W2PPB8 328 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 KIR3DP1A8MWS1 328 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 F2Z2F3 143 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 RTN4RL2Q86UN3 420 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 LYPD6BQ8NI32 183 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 EEF1AKMT3Q96AZ1 226 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 MRAP2Q96G30 205 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 SPANXA1Q9NS26 97 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 SPATA31B1PQ5VZV4 182 aa16.27■□□□□ 0.2
SHANK1-203ENST00000391813 RNF144BQ7Z419 303 aa16.27■□□□□ 0.19
SHANK1-203ENST00000391813 ZIC4Q8N9L1 334 aa16.27■□□□□ 0.19
SHANK1-203ENST00000391813 EFNA2O43921 213 aa16.26■□□□□ 0.19
SHANK1-203ENST00000391813 LILRA1O75019 489 aa16.26■□□□□ 0.19
SHANK1-203ENST00000391813 NAA38Q9BRA0 125 aaKnown RBP16.26■□□□□ 0.19
SHANK1-203ENST00000391813 FBXL15Q9H469 300 aa16.26■□□□□ 0.19
SHANK1-203ENST00000391813 INTS1Q8N201 2190 aaKnown RBP16.26■□□□□ 0.19
SHANK1-203ENST00000391813 CDKN1AP38936 164 aa16.26■□□□□ 0.19
SHANK1-203ENST00000391813 FAM74A4Q5TZK3 123 aa16.26■□□□□ 0.19
SHANK1-203ENST00000391813 FNDC10F2Z333 226 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 BMPERQ8N8U9 685 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 FAM216BQ8N7L0 139 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 LINC01560Q8TB33 94 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 ZNF815PA8K554 130 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 C8orf46Q8TAG6 207 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 A0A0G2JRQ6 117 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 ATP5G2Q06055 141 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 KIR3DL3Q8N743 410 aa16.25■□□□□ 0.19
SHANK1-203ENST00000391813 NEU4Q8WWR8 484 aaPredicted RBP16.25■□□□□ 0.19
SHANK1-203ENST00000391813 KLF17Q5JT82 389 aaPredicted RBP16.24■□□□□ 0.19
SHANK1-203ENST00000391813 COA6Q5JTJ3 125 aaKnown RBP16.24■□□□□ 0.19
SHANK1-203ENST00000391813 Q6ZRM9 215 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 PLA2G2CQ5R387 149 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 RNF125Q96EQ8 232 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 CCL19Q99731 98 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 TANC1Q9C0D5 1861 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 C15orf62A8K5M9 175 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 FAM106AQ4KMX7 169 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 Q6ZWC4 215 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 SLC50A1Q9BRV3 221 aa16.24■□□□□ 0.19
SHANK1-203ENST00000391813 TGFAP01135 160 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 FAM27E3Q08E93 113 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 DDB2Q92466 427 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 IGHV2OR16-5A0A0B4J2B6 119 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 FOXH1O75593 365 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 PF4V1P10720 104 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 DLX4Q92988 240 aaPredicted RBP16.23■□□□□ 0.19
SHANK1-203ENST00000391813 DPM3Q9P2X0 92 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 SFTA2Q6UW10 78 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 TEX43Q6ZNM6 134 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 LHX2P50458 406 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 IL15RAQ13261 267 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 C18orf32Q8TCD1 76 aa16.23■□□□□ 0.19
SHANK1-203ENST00000391813 TRAV8-4A0A0B4J246 113 aa16.22■□□□□ 0.19
SHANK1-203ENST00000391813 TCRAP04437 139 aa16.22■□□□□ 0.19
SHANK1-203ENST00000391813 NTF4P34130 210 aa16.22■□□□□ 0.19
SHANK1-203ENST00000391813 CHTOPQ9Y3Y2 248 aaKnown RBP16.22■□□□□ 0.19
SHANK1-203ENST00000391813 IGKV3D-15A0A087WSY6 115 aa16.22■□□□□ 0.19
SHANK1-203ENST00000391813 TRAV5A0A0B4J249 113 aa16.22■□□□□ 0.19
SHANK1-203ENST00000391813 SMAD7O15105 426 aaKnown RBP16.22■□□□□ 0.19
SHANK1-203ENST00000391813 H3BRM9 83 aa16.22■□□□□ 0.19
SHANK1-203ENST00000391813 ARPC1AQ92747 370 aa16.22■□□□□ 0.19
SHANK1-203ENST00000391813 LRRK1Q38SD2 2015 aa16.22■□□□□ 0.19
SHANK1-203ENST00000391813 UBE2L6O14933 153 aa16.21■□□□□ 0.19
SHANK1-203ENST00000391813 RNFT1Q5M7Z0 435 aa16.21■□□□□ 0.19
SHANK1-203ENST00000391813 C1orf147Q96MC9 270 aaPredicted RBP16.21■□□□□ 0.19
SHANK1-203ENST00000391813 SUMO2P61956 95 aaKnown RBP16.21■□□□□ 0.19
SHANK1-203ENST00000391813 LY6DQ14210 128 aa16.21■□□□□ 0.19
SHANK1-203ENST00000391813 IGHV3-35A0A0C4DH35 117 aa16.21■□□□□ 0.19
SHANK1-203ENST00000391813 IL18BPO95998 194 aa16.21■□□□□ 0.19
SHANK1-203ENST00000391813 C9orf106Q8NAJ2 232 aa16.21■□□□□ 0.19
SHANK1-203ENST00000391813 DYNLRB2Q8TF09 96 aa16.21■□□□□ 0.19
SHANK1-203ENST00000391813 D6R8Y8 96 aa16.21■□□□□ 0.18
SHANK1-203ENST00000391813 CEACAM4O75871 244 aa16.21■□□□□ 0.18
SHANK1-203ENST00000391813 PSG3Q16557 428 aa16.21■□□□□ 0.18
SHANK1-203ENST00000391813 FGFBP3Q8TAT2 258 aa16.21■□□□□ 0.18
SHANK1-203ENST00000391813 A0A1B0GUS0 222 aa16.2■□□□□ 0.18
SHANK1-203ENST00000391813 RSPO3Q9BXY4 272 aaPredicted RBP16.2■□□□□ 0.18
SHANK1-203ENST00000391813 AKAP6Q13023 2319 aa16.2■□□□□ 0.18
SHANK1-203ENST00000391813 TMEM249Q2WGJ8 235 aa16.2■□□□□ 0.18
SHANK1-203ENST00000391813 PAX1P15863 534 aa16.2■□□□□ 0.18
SHANK1-203ENST00000391813 PLNP26678 52 aa16.2■□□□□ 0.18
SHANK1-203ENST00000391813 ARTNQ5T4W7 220 aa16.2■□□□□ 0.18
SHANK1-203ENST00000391813 MOB4Q9Y3A3 225 aa16.2■□□□□ 0.18
SHANK1-203ENST00000391813 GFRA4Q9GZZ7 299 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 IGHV1-2P23083 117 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 KLHDC3Q9BQ90 382 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 DMRTC2Q8IXT2 367 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-203ENST00000391813 ERG28Q9UKR5 140 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 KIR2DL5BA0A0G2JN68 375 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 KIR2DL5BA0A0G2JPC4 375 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 C5orf63A6NC05 138 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 FAM231BA6NCW3 169 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 ADAMTSL5Q6ZMM2 481 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 KIR2DL5AQ8N109 375 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 MED12Q93074 2177 aa16.19■□□□□ 0.18
SHANK1-203ENST00000391813 MUC6Q6W4X9 2439 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms